Gene Sala_1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1208 
Symbol 
ID4080703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1249061 
End bp1249663 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content68% 
IMG OID638009569 
Producthypothetical protein 
Protein accessionYP_616257 
Protein GI103486696 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCT ATCTGTTGAT CGCCGGCGGT TATCTGCTCG GTTCCATTCC CTTCGGCGTC 
CTGCTGACGC GCGCATTCGG CGCGGGCGAC TTGCGGCAGA TCGGGTCGGG CAATATCGGC
GCGACCAATG TGCTGCGCAC CGGCCGCAAG GGGCTGGCGG CGGCGACCCT GCTGCTCGAC
GGCGCGAAGG GCGCGGCGGC GGTGTTGCTC GCACGGCATT TCGTGCCCCA GCTTGGCGAT
CATGCTGCGA TGATCGCGGG CGCCGCGGCG ATGATCGGTC ATTGCTATCC GGTGTGGCTG
AAGTTTCGCG GCGGCAAGGG CGTTGCCACG CTGCTTGGTC TTGCACTCGC GCTTGCCTGG
CCCATCGGCC TGATCTTTGC GGCGGTGTGG CTTGGCACCG TGTTGCTGCT GCGTTTCTCC
TCGCTCGGCG GGATGCTCGG CGCGGTGTCG GCCCCAGTTG CGGCGTTTGC GTTCGACTAT
CCGGTTTACG CCGTCGGACT CGCCGGGCTT GCGGTGATCG TGCTCTGGCG GCACCGCGAG
AATATCGCGC GGCTGCGCGC CGGGACAGAG CCGCGCGTCG GCGCCGCGAA AGAGCGCGCA
TGA
 
Protein sequence
MTIYLLIAGG YLLGSIPFGV LLTRAFGAGD LRQIGSGNIG ATNVLRTGRK GLAAATLLLD 
GAKGAAAVLL ARHFVPQLGD HAAMIAGAAA MIGHCYPVWL KFRGGKGVAT LLGLALALAW
PIGLIFAAVW LGTVLLLRFS SLGGMLGAVS APVAAFAFDY PVYAVGLAGL AVIVLWRHRE
NIARLRAGTE PRVGAAKERA