Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1208 |
Symbol | |
ID | 4080703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1249061 |
End bp | 1249663 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638009569 |
Product | hypothetical protein |
Protein accession | YP_616257 |
Protein GI | 103486696 |
COG category | [S] Function unknown |
COG ID | [COG0344] Predicted membrane protein |
TIGRFAM ID | [TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATCT ATCTGTTGAT CGCCGGCGGT TATCTGCTCG GTTCCATTCC CTTCGGCGTC CTGCTGACGC GCGCATTCGG CGCGGGCGAC TTGCGGCAGA TCGGGTCGGG CAATATCGGC GCGACCAATG TGCTGCGCAC CGGCCGCAAG GGGCTGGCGG CGGCGACCCT GCTGCTCGAC GGCGCGAAGG GCGCGGCGGC GGTGTTGCTC GCACGGCATT TCGTGCCCCA GCTTGGCGAT CATGCTGCGA TGATCGCGGG CGCCGCGGCG ATGATCGGTC ATTGCTATCC GGTGTGGCTG AAGTTTCGCG GCGGCAAGGG CGTTGCCACG CTGCTTGGTC TTGCACTCGC GCTTGCCTGG CCCATCGGCC TGATCTTTGC GGCGGTGTGG CTTGGCACCG TGTTGCTGCT GCGTTTCTCC TCGCTCGGCG GGATGCTCGG CGCGGTGTCG GCCCCAGTTG CGGCGTTTGC GTTCGACTAT CCGGTTTACG CCGTCGGACT CGCCGGGCTT GCGGTGATCG TGCTCTGGCG GCACCGCGAG AATATCGCGC GGCTGCGCGC CGGGACAGAG CCGCGCGTCG GCGCCGCGAA AGAGCGCGCA TGA
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Protein sequence | MTIYLLIAGG YLLGSIPFGV LLTRAFGAGD LRQIGSGNIG ATNVLRTGRK GLAAATLLLD GAKGAAAVLL ARHFVPQLGD HAAMIAGAAA MIGHCYPVWL KFRGGKGVAT LLGLALALAW PIGLIFAAVW LGTVLLLRFS SLGGMLGAVS APVAAFAFDY PVYAVGLAGL AVIVLWRHRE NIARLRAGTE PRVGAAKERA
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