Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1207 |
Symbol | |
ID | 4080702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1248095 |
End bp | 1248901 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638009568 |
Product | glutamate racemase |
Protein accession | YP_616256 |
Protein GI | 103486695 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0796] Glutamate racemase |
TIGRFAM ID | [TIGR00067] glutamate racemase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCCAC CCGCCCCCGA CGCGCCCATC CTCTTCTTCG ACAGCGGTCT CGGCGGGCTC TCCGTGCTTG GCCCGACGCG CGCGCTGCTG CCAACCGCGC CGATCGTCTA TGCCGCCGAC TATGCCGGTC TGCCCTATGG CAGGAAAAGC AACGAAGAGC TGGCCGCGCG CGTCCCGGCC TTGCTTGGGC GGCTCGTCGA GCGGTACCAG CCGCGCCTCG CCGTCATCGC GTGCAACACC GCCTCGACAA TCGCCCTCGG TCATGTCCGC GCCGCGCTCG ACCTGCCGAT CGTCGGCACC GTTCCCGCGA TCAAGCCTGC GGCCGAAATG ACGAAAAGCG GCGTGATCGG CGTACTCGGA ACCGAGGCGA CGGTGCGCCA ACCCTATGTC GACGACCTGA GCGCGCGTTT CGCGGGTGGC AAGACGGTGC TGCGCCACGG CAGCCCCGGC CTCGTCACCG GCGCCGAAGC CAGGTTGCGG GGCGAGACGG TCGATCCCGA GGTCATAGCC CGCGCGGTCG CGGGACTTCG CGATCAGCCT CGCGGCGACG CGATCGACGT CGTCGTGCTC GCCTGCACCC ATTTTCCACT CCTCAAGGAC GAACTGCAGG CGGGTTTCGG CCGCGGCGTC GCCTTGATCG ATGGCGCGGA GGGGATTGCG CGGCGCATCG CGCATCTGAC CGACGGGCAA GCCTGGCCCG CCATCGCCGT GCCGGGTATC GCGGTTTTCA CGCGCAGCGA CGAAAGGCCG CCGCCGCCGC TCGCCGTGCT CGCGCCCTAT GGCATCGGGT CGATCGAGAC GGTCTGA
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Protein sequence | MHPPAPDAPI LFFDSGLGGL SVLGPTRALL PTAPIVYAAD YAGLPYGRKS NEELAARVPA LLGRLVERYQ PRLAVIACNT ASTIALGHVR AALDLPIVGT VPAIKPAAEM TKSGVIGVLG TEATVRQPYV DDLSARFAGG KTVLRHGSPG LVTGAEARLR GETVDPEVIA RAVAGLRDQP RGDAIDVVVL ACTHFPLLKD ELQAGFGRGV ALIDGAEGIA RRIAHLTDGQ AWPAIAVPGI AVFTRSDERP PPPLAVLAPY GIGSIETV
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