Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1206 |
Symbol | |
ID | 4080701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1246738 |
End bp | 1247958 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638009567 |
Product | 5-aminolevulinate synthase |
Protein accession | YP_616255 |
Protein GI | 103486694 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase [TIGR01821] 5-aminolevulinic acid synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.41592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATTACA ACGATATTTT CGCTCGCGCG ATCGACCGGC TGCATGAAGA GGGACGCTAC CGCGTCTTTA TCGATATCCT GCGCAACAAG GGGGCTTATC CCAACGCGCG CTGCTTTGCG GGACACAACG GGCCAAAACC GATCACCGTG TGGTGCTCGA ACGACTATCT TGCGATGGGC CAGCATCCGA AGGTCATCGA GGCGATGGAA GCGGCGCTGC ACGACGTCGG CGCCGGGTCG GGCGGAACGC GCAACATCGG CGGCAACACG CACTATCACA TCGACCTCGA GGCCGAACTC GCCGACCTGC ACGGCAAGGA GGGCGCGCTG CTCTTCACAT CGGGCTATAT CTCGAACGAG GCGACGCTCG GCACGCTGGG CAAGCTGCTC CCGAACTGCA TCATCTATTC GGACGAACTC AACCACGCTT CGATGATCGC GGGTATCCGC AATTCGGGCT GCGAAAAGCG CGTGTGGCGG CACAACGACC TGGAGCATCT CGAGGAACTG CTCGCCGCCG ACGATCCCGA GGCGGCAAAG CTGATCGCGT TCGAAAGCGT CTACTCGATG GACGGCGATG TCGCCCCGAT CCACGCGATC TGCGATCTTG CAGAGAAATA TAACGCGCTT ACCTATTGCG ACGAAGTCCA TGCCGTCGGC ATGTACGGCC CGCGCGGCGG CGGCATCACC GACCGCGACG AGGCCGCGCA CCGCGTGACG ATCATCGAGG GGACGCTCGG CAAGGCGTTT GGCGTGATGG GCGGCTACAT CGCCGCCGAC AGGAATATCG TCGACGTGAT CCGCTCCTAT GCGCCGGGCT TCATCTTCAC GACCAGCCTC TCGCCCGTGC TTGTCGCCGG GGTGCTCGCG AGTGTGCGTC ACCTGAAGCA ATCGAGCGTC GAGCGCGACG CGCAACAGGC AGCTGCCGCC TATCTCAAGC AATGTTTCCG CGACGCGGGC CTGCCGGTGA TGGATTCGAC GACGCACATC GTCCCGCTGA TGGTTGGCGA CCCGGTGCGC GCAAAGAAGA TCAGCGACAT ATTGCTCGCC GAATATGGCG TCTATGTCCA GCCGATCAAT TTCCCGACCG TGCCGCGCGG CACCGAACGC CTGCGCTTCA CCCCCGGCCC CGCGCATGAC GAAGCGATGA TGCGCGAGTT GACCAGCGCG CTCGTCGAAA TCTGGGACCG GCTGGAATTG CAGCTCCAGA AGGCGGCGTG A
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Protein sequence | MNYNDIFARA IDRLHEEGRY RVFIDILRNK GAYPNARCFA GHNGPKPITV WCSNDYLAMG QHPKVIEAME AALHDVGAGS GGTRNIGGNT HYHIDLEAEL ADLHGKEGAL LFTSGYISNE ATLGTLGKLL PNCIIYSDEL NHASMIAGIR NSGCEKRVWR HNDLEHLEEL LAADDPEAAK LIAFESVYSM DGDVAPIHAI CDLAEKYNAL TYCDEVHAVG MYGPRGGGIT DRDEAAHRVT IIEGTLGKAF GVMGGYIAAD RNIVDVIRSY APGFIFTTSL SPVLVAGVLA SVRHLKQSSV ERDAQQAAAA YLKQCFRDAG LPVMDSTTHI VPLMVGDPVR AKKISDILLA EYGVYVQPIN FPTVPRGTER LRFTPGPAHD EAMMRELTSA LVEIWDRLEL QLQKAA
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