Gene Sala_1205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1205 
Symbol 
ID4080700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1246052 
End bp1246741 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content66% 
IMG OID638009566 
Productnitroreductase 
Protein accessionYP_616254 
Protein GI103486693 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGAAG CGCCCGGTTT CGATGAGGTT GTCGTCGGGC GTCGCTCGAT CCGCGGCTTC 
CTCGACAAGC CCGTTTCCAA AGAGCTGATC GCGGAAATCA TCGCCGTGGC GATGCGCGCG
CCGTCGTCGT TCAACAACCA GTGCTGGAAC TTTTCGGTCG TCACGGGCGC GCCGCTCGAC
GCCATCCGCC GCGGCAACAC CGAGGGCGTC CTGGCGGGCA AGCCCGACAG CCGCGAGTTT
CGCCGTTTCG ACAAGGTGCC CGACGCACAT CGCGGTCGCC AGATCGAGAT CGCCAAACAG
CTCTTCGGCG CCATGGGCAT CGCGCGCGAC GACAAGGACG CGCGGCAGGA CTGGGTGCTG
CGCGGCTTTC GCCAGTTCGA CGCGCCGGTC AGCATCGTCG TCACCTATGA CCGCGTCCTG
CTGGGCAGCG ACATCGCGCC CTTCGACTGC GGCGCGGTCA CCAACGCGCT GGTCAACGCC
GCCTGGTCGC GCGGGCTGGG CTGCGTCATC AACAGCCAGG GCATCATGCA AAGCCCGGTG
GTGCGCGAAC ATGCGCGCAT CCCCGACGAT CAGGTCATCA TGATCTGCGT TGCGATGGGC
TGGCCCGACG CCGATTTTCC GGCGAACGCG GTGGTGTCGA ACCGCAAGAG CATCGAAGAG
GCCGTGCGTT TCGTGGGGTT CGACGATTGA
 
Protein sequence
MTEAPGFDEV VVGRRSIRGF LDKPVSKELI AEIIAVAMRA PSSFNNQCWN FSVVTGAPLD 
AIRRGNTEGV LAGKPDSREF RRFDKVPDAH RGRQIEIAKQ LFGAMGIARD DKDARQDWVL
RGFRQFDAPV SIVVTYDRVL LGSDIAPFDC GAVTNALVNA AWSRGLGCVI NSQGIMQSPV
VREHARIPDD QVIMICVAMG WPDADFPANA VVSNRKSIEE AVRFVGFDD