Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1205 |
Symbol | |
ID | 4080700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1246052 |
End bp | 1246741 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638009566 |
Product | nitroreductase |
Protein accession | YP_616254 |
Protein GI | 103486693 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCGAAG CGCCCGGTTT CGATGAGGTT GTCGTCGGGC GTCGCTCGAT CCGCGGCTTC CTCGACAAGC CCGTTTCCAA AGAGCTGATC GCGGAAATCA TCGCCGTGGC GATGCGCGCG CCGTCGTCGT TCAACAACCA GTGCTGGAAC TTTTCGGTCG TCACGGGCGC GCCGCTCGAC GCCATCCGCC GCGGCAACAC CGAGGGCGTC CTGGCGGGCA AGCCCGACAG CCGCGAGTTT CGCCGTTTCG ACAAGGTGCC CGACGCACAT CGCGGTCGCC AGATCGAGAT CGCCAAACAG CTCTTCGGCG CCATGGGCAT CGCGCGCGAC GACAAGGACG CGCGGCAGGA CTGGGTGCTG CGCGGCTTTC GCCAGTTCGA CGCGCCGGTC AGCATCGTCG TCACCTATGA CCGCGTCCTG CTGGGCAGCG ACATCGCGCC CTTCGACTGC GGCGCGGTCA CCAACGCGCT GGTCAACGCC GCCTGGTCGC GCGGGCTGGG CTGCGTCATC AACAGCCAGG GCATCATGCA AAGCCCGGTG GTGCGCGAAC ATGCGCGCAT CCCCGACGAT CAGGTCATCA TGATCTGCGT TGCGATGGGC TGGCCCGACG CCGATTTTCC GGCGAACGCG GTGGTGTCGA ACCGCAAGAG CATCGAAGAG GCCGTGCGTT TCGTGGGGTT CGACGATTGA
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Protein sequence | MTEAPGFDEV VVGRRSIRGF LDKPVSKELI AEIIAVAMRA PSSFNNQCWN FSVVTGAPLD AIRRGNTEGV LAGKPDSREF RRFDKVPDAH RGRQIEIAKQ LFGAMGIARD DKDARQDWVL RGFRQFDAPV SIVVTYDRVL LGSDIAPFDC GAVTNALVNA AWSRGLGCVI NSQGIMQSPV VREHARIPDD QVIMICVAMG WPDADFPANA VVSNRKSIEE AVRFVGFDD
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