| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1185 |
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| Symbol | |
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| ID | 4080833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1224308 |
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| End bp | 1225963 |
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| Gene Length | 1656 bp |
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| Protein Length | 551 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638009546 |
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| Product | electron-transferring-flavoprotein dehydrogenase |
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| Protein accession | YP_616234 |
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| Protein GI | 103486673 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0644] Dehydrogenases (flavoproteins)
[COG2440] Ferredoxin-like protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.068389 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAAC GGGAATCGAT GCCCTATGAC GTGGTCATTG TCGGTGCGGG TCCGGCAGGG
CTTTCGGCGG CGATCCGCCT CAAACAACTG GCAAACGAAG CGGGCGGCGA ATTGTCGGTG
TGCATTCTCG AAAAAGGGTC GGAGGTCGGC GCGCACATCC TGTCGGGGGC GGTCATCGAT
CCCCGGTCGC TCGACGAACT ATTGCCCGAA TGGCGCACCA TGGGTTGTCC GCTGGCCGAG
GTGCCGGTCA ACGACAACCA GCATTGGGTG CTCACCAAGA ACAGGAAGTT CAGCCTGCCC
GAGTTCATCT CGCCCCCCTT CATGCACAAC GAGGGCACCT ATACGGGCAG CCTCGGTAAT
CTTTGCCGCT GGCTTGCGGA GCAAGCCGAA GGGCTTGGGG TCGAAATCTT CCCCGGCTTT
CCGGCGGCGG AAATCCTTTA CAATGACGAT GGTTCGGTCA AAGGCGTCGC CACCGGCGAC
ATGGGCGTCG CGCGCGACGG CAGCCACAAG GCTGACTACG CCCCTGGCCT CGAACTCCAC
GCTAAATATA CCTTCTTTGC CGAAGGCGCA CGCGGACATC TGACCAAGAT GCTGAAATCG
CAATTCGCGC TTGATGCCGA TTGCGAACCG CAAGTCTATG GACTTGGCGT CAAGGAACTG
TGGGACATCG ACCCCGAAAA TCACGCGCCG GGGCGTGTGA TCCACACGCA GGGCTGGCCG
CTCGACGAAC ATGCCAATGG CGGGGGCTTC CTCTATCATC AAGCGAACGG GCAGGTTGCG
CTGGGTTTTG TGACCTGGCT CAACTATCGC AATCCGCACA TCTCCCCCTT TCAGGAAATG
CAGAAGTGGA AGACGCATCC CGAGATCGCG AAGATTCTGA AGGGCGGCAA GCGCGTTTCC
TATGGCGCGC GCGCGATCAG CGACGGCGGC TATCAGTCGG TGCCGAAACT GGCTTTCCCC
GGTGGCGCGT TGATAGGAGA CAGCGCCGGT TTCCTCAACG TGCCACGGAT CAAGGGCACG
CACACCTCGA TGAAGTCGGG CATGATGGCG GCCGAAGCGG CCTTTGCCGC TGTGAGCGCG
GGGCGCGCGG GCGACACGCT CGACGCCTAT CAGGCCGCCT ATGACGACAG TTGGGTCAAG
AAAGAACTCA GCGTCGTGCG CAACGTGCTG CCGCTCGTCG AAAAATGGGG CGACCTCGGC
GGAACGATCC TTGCGGGCAT CACCATGTGG GCCGAAACGC TCAAGATCAA AATGCCGTTC
ACGATGAAGC ATCATCCCGA CAATGAGACG CTCTATCGCG CCGACATGAT GCCGAAGCCC
GACTATCCGA AACCCGACGG CGTGCTGACC TTTGACCGCC TCTCTTCGGT GTTCCTGTCG
AACACCAACC ATGAGGAGGA CCAGCCCGTC CACCTCCAGC TCAAGGATCC GTCGATCCCG
GTCGAATATA ATCTGCCGCT CTATGATGAG CCTGCCCAGC GTTATTGCCC CGCCGGGGTC
TATGAAATTG TCGGGCAGGA AGAGGGCAAT CCCCGGTTCG TGATCAACGC GCAGAATTGT
GTGCATTGCA AGACGTGTGA CATCAAGGAT CCGACCCAGA ACATCAACTG GGTCACCCCC
GAAGGCGGCG GAGGGCCCAA TTATCCGAAT ATGTAA
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| Protein sequence | MSERESMPYD VVIVGAGPAG LSAAIRLKQL ANEAGGELSV CILEKGSEVG AHILSGAVID
PRSLDELLPE WRTMGCPLAE VPVNDNQHWV LTKNRKFSLP EFISPPFMHN EGTYTGSLGN
LCRWLAEQAE GLGVEIFPGF PAAEILYNDD GSVKGVATGD MGVARDGSHK ADYAPGLELH
AKYTFFAEGA RGHLTKMLKS QFALDADCEP QVYGLGVKEL WDIDPENHAP GRVIHTQGWP
LDEHANGGGF LYHQANGQVA LGFVTWLNYR NPHISPFQEM QKWKTHPEIA KILKGGKRVS
YGARAISDGG YQSVPKLAFP GGALIGDSAG FLNVPRIKGT HTSMKSGMMA AEAAFAAVSA
GRAGDTLDAY QAAYDDSWVK KELSVVRNVL PLVEKWGDLG GTILAGITMW AETLKIKMPF
TMKHHPDNET LYRADMMPKP DYPKPDGVLT FDRLSSVFLS NTNHEEDQPV HLQLKDPSIP
VEYNLPLYDE PAQRYCPAGV YEIVGQEEGN PRFVINAQNC VHCKTCDIKD PTQNINWVTP
EGGGGPNYPN M
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