| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1180 |
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| Symbol | |
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| ID | 4080828 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1218331 |
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| End bp | 1219935 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638009541 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_616229 |
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| Protein GI | 103486668 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.941071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAATGC AGGGCCAGCC GCTGCTCGTC ACCAGCCTGA TCGACCACGC CGCACGCGAA
CATGCGGGAC GCGAGATTGT GTCGCGATGG GCCGACGGGA GGGTGACGCG ATCGAACTGG
GGCGAAGTCG GGACCGACGC CCGGCGCTTT GCCGCCGCGA TGGTGAAGCT GGGCATGAAA
AAGGGCGACC GTATCGCGAC GCTGGCGATG AACCACGGTC ACCATCTGGT GAGCTGGTAC
GGCACCGCGG GCATGGGCGG GGTGCTGCAC ACGGTGAACC CGCGGCTGTT CGACGAACAG
CTTGTCTACA TCATCAATCA TGCCGAAGAC CGGGTGCTGT TCTTCGACGC GGCCTTCCTG
CCGATCGTCG AGCGGCTGCG TGGCCAGCTG ACCAGTGTCG AGCATTTCGT CCTGTTCGAT
GCGTCGGCGC AGGGCGATTA CAAATCCTAT CGCGACCTGG TCGATGCCGA GGATGGCGAT
TTCGAGTGGG TCGAACTGGG CGAACGCGAT CCGGTCGGGC TTTGCTACAC CAGCGGCACG
ACGGGCAACC CCAAGGGCGT GCTTTACGAG CATCGCTCGA ACGTCATCCA TGCAATCACC
GAAATCCAGC CGGACGCCTT TGACCTGTCG AGCCGGAGCG TCATCCTGCC GATCGTGCCG
ATGTTCCACG CGAACAGTTG GGGCATTCCC TTTGCAGCGG CGACGGTGGG CGCGAAGCTG
GTCTTTTCGG CGACCAATGA TGCGCAGACC CTGTGTGACC TGATGCACGC CGAGGGCGTC
ACCCACAGCG CCGGGGTGCC GACCGTCTGG CTGGCGATGT TCGCGCATAT GGATGCGACG
GGCATGGGTT ATGGCGCGCT CAAGCATGTC ATCATCGGCG GGTCGGCGGC CCCGCGCGCG
ATGATTGAAC GCTTTATGAA GGCCGGTGTC TATGTCGGGC ACGCCTGGGG CATGACCGAG
ACCAGCCCGA TCGGGACGAT GGGCAAGCGG CCGTGGAACT GGGATGCGCT GAGTTTTGAC
GAGCAGGTCG ACATCATCTG CCGCCAGGGC TGTCCGCCGT TCGGGGTCGA ACTGCGGATC
GTCGATGACG AGGGCAAGGA ACTGCCGCGC GACGGCCAGA CCAGCGGACG GCTCCAGATC
CGTGGGCCGT GGATCATTCA GCGTTATTTC AAGGCCGATG CCGACGCTGC CGACGCCGAT
GGCTGGTTCG ACACGGGCGA TGTGTCGGTG CTCCATCCCG ATGGCGTCAT GCAGATCACC
GACCGCGCGA AGGACGTCAT CAAGTCGGGC GGCGAATGGA TCAGCTCGAT CGAGCTGGAA
AATGCCGCGG TCGGAGCGCC GGGCGTGCAG GAAGCCGCTG CGGTCGGCGT CTATCACCCC
AAATGGGACG AGCGGCCGAT CCTGCTGATC GTGAAGAAAC CGGGTGCCGA GGTGAGCGAG
GCGGCGATCA TTGAATATCT GAAGGACAAG GTCGCCAAAT GGTGGCTACC CGACGAGGTC
GTGTTCGTCG ACGAACTGCC GCACACCGCC ACGGGCAAGA TTTTGAAGCG CCAGATCCGC
GATGACTATA AGGATTACAA GCTGAAGTCG CTGGCAGAGG CGTAA
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| Protein sequence | MGMQGQPLLV TSLIDHAARE HAGREIVSRW ADGRVTRSNW GEVGTDARRF AAAMVKLGMK
KGDRIATLAM NHGHHLVSWY GTAGMGGVLH TVNPRLFDEQ LVYIINHAED RVLFFDAAFL
PIVERLRGQL TSVEHFVLFD ASAQGDYKSY RDLVDAEDGD FEWVELGERD PVGLCYTSGT
TGNPKGVLYE HRSNVIHAIT EIQPDAFDLS SRSVILPIVP MFHANSWGIP FAAATVGAKL
VFSATNDAQT LCDLMHAEGV THSAGVPTVW LAMFAHMDAT GMGYGALKHV IIGGSAAPRA
MIERFMKAGV YVGHAWGMTE TSPIGTMGKR PWNWDALSFD EQVDIICRQG CPPFGVELRI
VDDEGKELPR DGQTSGRLQI RGPWIIQRYF KADADAADAD GWFDTGDVSV LHPDGVMQIT
DRAKDVIKSG GEWISSIELE NAAVGAPGVQ EAAAVGVYHP KWDERPILLI VKKPGAEVSE
AAIIEYLKDK VAKWWLPDEV VFVDELPHTA TGKILKRQIR DDYKDYKLKS LAEA
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