| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1176 |
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| Symbol | |
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| ID | 4080824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1212819 |
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| End bp | 1213496 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638009537 |
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| Product | ABC transporter related |
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| Protein accession | YP_616225 |
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| Protein GI | 103486664 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.495851 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATG CGGTGCTCGA ACTGGTCGAC CTCAAGCGCA GCTTCCGCCA AGGCGACGTC
ACCATCGACG TGTTGCGCGG TGTCAATGCG TCGCTGCGCC GCGGTGAGAT CGTCGCGCTG
CTCGGCCCGT CGGGATCGGG CAAGTCGACG ATGCTGCAGG CAGTCGGATT GCTCGAAGGC
GGTTTTGGCG GAACGATCCG CATCGATGGC GAGGATGTGA CGCGCTTTCA GCAGGGCGAA
CGCACCAAGA CGCGGCGCGA AAAGATCGGC TTCGTCTATC AGTTTCACCA CCTGCTCCCC
GACTTCAACG CGATCGAGAA TGTCGTGTTG CCGCAGCTCA TCCGCGGTGC GGGGCAGGCG
GAGGCAGAGG ATCGCGCCGC CGACCTGCTC GCTCGGCTGG GGCTGAGCGA GCGGCTGCAC
CACAAGCCGA GCAAGCTGTC GGGCGGCGAA CAACAGCGCG TCGCGGTGGC GCGCGCGCTG
GCAAACCGGC CGTTGCTCGT GCTTGCCGAC GAGCCGACGG GCAATCTTGA CGAGGCGACC
GCGGACCGCG TGTTCGACCA GTTCGTCGCG CTGGTTCGCG ATCACGGCTC GGCGGCGCTG
GTTGCGACGC ACAATGAACG GCTTGCGGCG CGGATGGACT GCGTGCTGCG CTTGCACGAG
GGGCGTATCG AGGCGTAG
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| Protein sequence | MNDAVLELVD LKRSFRQGDV TIDVLRGVNA SLRRGEIVAL LGPSGSGKST MLQAVGLLEG
GFGGTIRIDG EDVTRFQQGE RTKTRREKIG FVYQFHHLLP DFNAIENVVL PQLIRGAGQA
EAEDRAADLL ARLGLSERLH HKPSKLSGGE QQRVAVARAL ANRPLLVLAD EPTGNLDEAT
ADRVFDQFVA LVRDHGSAAL VATHNERLAA RMDCVLRLHE GRIEA
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