Gene Sala_1164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1164 
Symbol 
ID4080870 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1196355 
End bp1199060 
Gene Length2706 bp 
Protein Length901 aa 
Translation table11 
GC content65% 
IMG OID638009525 
ProductDNA gyrase subunit A 
Protein accessionYP_616213 
Protein GI103486652 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.703676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.148807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGCCGT CCGAGGACGG CGTTTCGCCG ATCAACATCG TCGACGAAAT GAAGACCAGC 
TACCTCGATT ACGCGATGAG CGTGATCGTC AGCCGCGCGC TGCCCGACGT GCGCGACGGG
CTGAAGCCCG TCCACCGCCG CATCCTCTAT GCGGCGCAGG AAGGCGGCTT CATCCCCGGT
CGTCCGTACA AGAAATCGGC GAAGATCGTC GGCGACGTCA TGGGTAATTA TCACCCGCAC
GGCGACAGCG CGATCTATGA CGCGCTGGCG CGGATGACGC AGGACTGGTC GCTGCGCGTG
CCCTTGATCG ACGGTCAGGG CAATTTCGGC TCGATGGACC CCGACCCGCC GGCGTCGATG
CGCTACACCG AGGCGCGCCT TGCCAAGACC GCGATGGTGC TGCTGAACGA TCTCGACAAG
GATACGGTCG ACTTCCAGCC CAATTATGAC GCGAGCCGTG AGGAGCCGAC CGTGCTTCCG
GCGCGCTTCC CGAATCTGCT CGTCAACGGC GCGGGCGGGA TCGCGGTCGG CATGGCGACC
AATATCCCGC CGCACAACCT TGGCGAAATC ATCGACGCGA CGCTCGCGAT GATCGACAAT
CCGGCGATCA CGCTTGAAGA ATTGATGGCG ATCGTCCCCG GCCCCGATTT CCCGACGGGC
GCGATGATGC TCGGCCAGGG TGGCGCACGC AGCGCCTATG CAACCGGCCG CGGCTCGATC
ATGATGCGCT CCACCCATGT AATAGAGGAA GGCAGGAACG ATCGACAATC CATTGTATTA
ACGTCGATTC CGTTCCAGGT CGGCAAGTCG GGCCTTGTCG AGAAGATCGC CGAGGCGGCG
CGCGACAAGC GGATCGAGGG CGTCGCCGAT ATCCGCGACG AATCGAACCG CGAGGGCGTG
CGCGTCGTCA TCGAGCTGAA GCGCGACGCG ACGGCAGAGG TGGTGCTCAA CCAGCTGTGG
CGTCACACGC CCGCGCAGTC GAGCTTTCCC GCGAACATGC TCGCGATCCG CGGCGGCCGC
CCCGAAATGA TGGGGCTGAA GGATATTCTC TCGGCCTTCA TCATCTTCCG CGAAGAGGTC
ATCACCCGCC GCTGCAAGTT CGAACTCGCC AAGGCACGCG ACCGCGCGCA TATCTTGCTC
GGCCTCGTCG TCGCGGTCAG CAACCTCGAC GAAGTCGTGC GCATCATTCG CGGTTCGTCC
TCGCCCGCCG CCGCGCGCGA AGCCCTGCTC GCGCGCGAAT GGCCGATCGG CGACATCGCC
CCCTATATCC GCCTCGTCGA AGCAATCGAG GGCGAGATGG AGGAAGCCGC AACCTATCGG
CTGTCCGAAG TGCAGGTGAA GGCGATCCTC GACCTCCGCC TCCACCGGCT GACGGCACTG
GGTCGCGACG AAATCGGCAA GGAACTCGGT GAGTTGGCAG CCGAAATTGA GGAACTGCTT
TCGATCCTCG CCGACCGCGT CAAGCTATAT GGCGTGATGC GCGAGGAACT GGTTGCGGTG
CGCGACGAAT TTGCGACCCC GCGCCGCACC CTCCTCGCCC CCGCCGCCGA CGGCATCGAC
GACGAAGATC TGATCGAGCG CGAGGAGATG GTCGTCACCG TCACGATGGA CGGCTATATC
AAGCGGACGC CCCTGGCCAC CTTTCGCGCA CAGCGACGCG GCGGCAAGGG CCGCGCAGGC
ATGGCGACGA AGGACGAGGA TGTCGTCACC GAACTGTTCG TCACCTCGAC GCACACGCCG
GTGCTCTTCT TCTCGACCGC GGGCAAGGTC TATCGCATGA AGGTGTGGCG CCTGCCCGAG
GGCGGCCCTG CGACGCGCGG CCGTCCGATG ATCAACCTGC TCCCGCTTGC CCAGGGCGAA
ACCATCTCGA CCGTGCTGCC GCTGCCCGAG GACGAGAGCG AATGGGGCAA GCTGCACGTC
ATGTTCGCAA CCGCGAAGGG CAGCGTGCGC CGCAACAGCA TGGACGCCTT CACCAACGTC
CCCTCGAACG GCAAGATCGC GATGAAGTTC GAGGGCGATG ACGAGGACGA CCGGCTGATC
GGCGTCGCGC TGCTCGACGA AAGCGACGAT GTGCTGCTCG CGACGCGGCA GGGCAAGGCG
ATCCGCTTTG CCGGCGACGA TGTCCGCGAG TTTCAGAGCC GCAATTCGAC CGGGGTGCGC
GGGATGCGCC TGGCCGAGGG GGATGAGGTT ATTTCGCTCT CGATCCTCCA CCGCGTCGGC
ACCACCGGCG ACGAACGCGA AGCCTATCTG CGCGCCGCGC CGTGGAAGGA TAACGAGAAT
GAACCGACCT TGCCCGCCGA ACGCATGGCC GAACTGGCGG CGCGCGAACA GTTCATCCTG
ACCGTTTGTG CCAATGGCTA TGGCAAGCTG TCGTCGGCCT ATGAATATCG CCGCACGGGC
CGCGGCGGTC AGGGGATTAC CAATATCGAC AATATCGCGC GCAACGGCCC GGTGGTCGCC
AGCTTCCCCG CCACGCAGGC GCACCAGCTG ATGCTCGTCA CCGATCAGGC CAAACTCATC
CGCATGGGGC TCGACAGCTT GCGCATCATC GGCCGCGGCA GCGCGGGCGT GCGCCTGTTC
GATGTCGCCG AGGGCGAGCA TGTCGTGTCG GCCGCGCTGA TCGAAGATGG CGACGAAGAC
GCGGATGACG GCCGCGACGT CGAGGTGGCG AGCGACAATC CGGTGAGCGA AGCCCCCACC
GAATGA
 
Protein sequence
MQPSEDGVSP INIVDEMKTS YLDYAMSVIV SRALPDVRDG LKPVHRRILY AAQEGGFIPG 
RPYKKSAKIV GDVMGNYHPH GDSAIYDALA RMTQDWSLRV PLIDGQGNFG SMDPDPPASM
RYTEARLAKT AMVLLNDLDK DTVDFQPNYD ASREEPTVLP ARFPNLLVNG AGGIAVGMAT
NIPPHNLGEI IDATLAMIDN PAITLEELMA IVPGPDFPTG AMMLGQGGAR SAYATGRGSI
MMRSTHVIEE GRNDRQSIVL TSIPFQVGKS GLVEKIAEAA RDKRIEGVAD IRDESNREGV
RVVIELKRDA TAEVVLNQLW RHTPAQSSFP ANMLAIRGGR PEMMGLKDIL SAFIIFREEV
ITRRCKFELA KARDRAHILL GLVVAVSNLD EVVRIIRGSS SPAAAREALL AREWPIGDIA
PYIRLVEAIE GEMEEAATYR LSEVQVKAIL DLRLHRLTAL GRDEIGKELG ELAAEIEELL
SILADRVKLY GVMREELVAV RDEFATPRRT LLAPAADGID DEDLIEREEM VVTVTMDGYI
KRTPLATFRA QRRGGKGRAG MATKDEDVVT ELFVTSTHTP VLFFSTAGKV YRMKVWRLPE
GGPATRGRPM INLLPLAQGE TISTVLPLPE DESEWGKLHV MFATAKGSVR RNSMDAFTNV
PSNGKIAMKF EGDDEDDRLI GVALLDESDD VLLATRQGKA IRFAGDDVRE FQSRNSTGVR
GMRLAEGDEV ISLSILHRVG TTGDEREAYL RAAPWKDNEN EPTLPAERMA ELAAREQFIL
TVCANGYGKL SSAYEYRRTG RGGQGITNID NIARNGPVVA SFPATQAHQL MLVTDQAKLI
RMGLDSLRII GRGSAGVRLF DVAEGEHVVS AALIEDGDED ADDGRDVEVA SDNPVSEAPT
E