| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1161 |
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| Symbol | |
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| ID | 4080867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1194499 |
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| End bp | 1195344 |
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| Gene Length | 846 bp |
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| Protein Length | 281 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638009522 |
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| Product | taurine catabolism dioxygenase TauD/TfdA |
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| Protein accession | YP_616210 |
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| Protein GI | 103486649 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00427132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.195503 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCTCG CCATCATCCC CAGCGGCCAG GCGTGCGGCG CGCACGTTAC TGGCGTCGAC
CTGGCGCACC CGCTCGATCC CGGCACCATC GCCGCCATCC GTGCGGCGTG GCTCGATCAT
CATGTGCTGG CTTTTCCGGA CCAGAAGATG AGCGACGACG ATCTCGAACG CTTCACCGCC
TATTTCGGCG GTTTCGGCGA CGATCCCTTC ATTCGCCCGA TTCCGGGCCG CAAGCATATC
ATCGCGGTCA AGCGCCGCGC CGACGAAACC GCGCCGCTCT TTGCCGAAAA CTGGCACAGC
GACTGGAGCT TCCAGGCCCG CCCGCCCGCG GGCACGTGCC TCTTCGGCAT CACCATTCCC
CCGGTCGGCG GCAACACCGA ATTTGCCAAT CAGCACGCAG CGCTCGATGC GATGCCCGCG
GGGCTCCGCG CACGTATCGA GGGTTTGCGG GCGATCCACA GCGCCCGCGC GGGCTACGCC
CCTTCGGGCA TGTACGGCGC GAACGACAGG GGCCGGAGCA TGGATATCCG CTCGGACGAT
GCGGCGCTCG AAACGCAGCT CCATCCCTTC GTTCGCGCGC ACCCCGAAAC GGGCCGCCTC
GGCCTGTTCG GCTGCGCGGG TTATATCATC GGCTTTGAGG GAATGGACGA TGCCGAGGCG
CGGCCGCTCC TCCACGAGCT CATCCAGTGG CAGGGGCGCG AAGAGTTCCG TTATTCGCAC
CGATGGGAGC CCGACATGCT CGTCATGTGG GACAATCGCT CGGTCCTCCA CCGCGCGACG
GGCGGTTATG ACGGCCACGA TCGCCTGCTT CACCGCACCA CCATCGCGGC CTGGGAGGGA
ATCTAG
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| Protein sequence | MTLAIIPSGQ ACGAHVTGVD LAHPLDPGTI AAIRAAWLDH HVLAFPDQKM SDDDLERFTA
YFGGFGDDPF IRPIPGRKHI IAVKRRADET APLFAENWHS DWSFQARPPA GTCLFGITIP
PVGGNTEFAN QHAALDAMPA GLRARIEGLR AIHSARAGYA PSGMYGANDR GRSMDIRSDD
AALETQLHPF VRAHPETGRL GLFGCAGYII GFEGMDDAEA RPLLHELIQW QGREEFRYSH
RWEPDMLVMW DNRSVLHRAT GGYDGHDRLL HRTTIAAWEG I
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