| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1149 |
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| Symbol | |
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| ID | 4080894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1184498 |
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| End bp | 1185634 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638009510 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_616198 |
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| Protein GI | 103486637 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.811771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.827716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTCCC CCATTTGCGC GATGCTCGGC ATCGAATTCC CGCTGCTCGC CTTTTCGCAC
TGCCGCGACG TCGTCGTCGC GGTGTCGAAA GCGGGTGGCA TGGGCGTGTT CGGCGCGGCT
GCGCTGCCGC CCGAACGGCT GGAAGAAGAG CTGGCGTGGA TCGACGCGCA TATCGGCGGC
CGCCCCTATG GCGTCGACCT GATCGTCCCC AACAGCTTTG CGGGCAAGGG CGAAGCAGCC
TCGTCCGGCG CCGCGCAGAT TCCCGAATCC CACCTGAAGT TCGCCGCCGA TCTGCTCGGA
AGGTTCGATG TCGATGCGAG CGGCCTCGAG ACTGCGATGG AAGCGCGGCA GAGCTTTGGC
GACAATATGC ACGAAGAAGG CGCCGCAAGG CTGCTCGAGG TCGCTTTCCG CCATCCGATC
AAGCTGATCG CCAATGCGCT GGGCGTCCCG CCGCCGCTGA TGCTCGAACT CGGCAAGCGC
CACAACGTCC CGGTCGCCGC GCTTGTCGGC ACGCGCGACC ATGCGCTGGC GCAGGTGCGC
GCGGGGGTGG ACATCCTTGT CGTCGCGGGC GGCGAAGCGG GCGGCCATTG CGGCGAGGTC
GCGACGATGG TGCTCGTGCC CGAAGTCGCA GCGGCGCTCG ACGCGATCGG CGACACGACG
CCGATTCTCG CGGCGGGCGG CATCGTCACC GGGCGCCAGA TGGCGGCGGC GATGGCGATG
GGCGCCCACG GCGCGTGGAC CGGATCGGTC TGGCTGACGA CCGCCGAAGC CGAGACCAAC
CCGGTGGTGA AGGAAAAGCT GCTCGCCGCC TCGGCGCGCG ACACGGTGCG CTCGAAGAGC
CGTACCGGCA AGCCCTCGCG CCAGCTCCGC TCGCCGTGGA CCGATGCGTG GGAAGCCGAA
GGCGCGCCGA AACCGCTGCC GATGCCGCTC CAGTCGCTGG TCAGCGAACC CGCGCTGCGC
AAGGTCGACA AGCTGGCGGA AGGCGGCCAC GAGGGTGCAA AAGCACTCGC CACCTATTGG
GTCGGCCAGG GTGTCGGGCT GATGAACGAG GCAATGGGCG CCGGACAGGT CGTGCAGGCG
TTCAAGCAGG ACTGGATCGT CGCGTGCGAG CGGCTGAACG GGTTTTTGGA AGAATAG
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| Protein sequence | MQSPICAMLG IEFPLLAFSH CRDVVVAVSK AGGMGVFGAA ALPPERLEEE LAWIDAHIGG
RPYGVDLIVP NSFAGKGEAA SSGAAQIPES HLKFAADLLG RFDVDASGLE TAMEARQSFG
DNMHEEGAAR LLEVAFRHPI KLIANALGVP PPLMLELGKR HNVPVAALVG TRDHALAQVR
AGVDILVVAG GEAGGHCGEV ATMVLVPEVA AALDAIGDTT PILAAGGIVT GRQMAAAMAM
GAHGAWTGSV WLTTAEAETN PVVKEKLLAA SARDTVRSKS RTGKPSRQLR SPWTDAWEAE
GAPKPLPMPL QSLVSEPALR KVDKLAEGGH EGAKALATYW VGQGVGLMNE AMGAGQVVQA
FKQDWIVACE RLNGFLEE
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