| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1138 |
|---|
| Symbol | argS |
|---|
| ID | 4080883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 1175449 |
|---|
| End bp | 1177176 |
|---|
| Gene Length | 1728 bp |
|---|
| Protein Length | 575 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638009499 |
|---|
| Product | arginyl-tRNA synthetase |
|---|
| Protein accession | YP_616187 |
|---|
| Protein GI | 103486626 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0018] Arginyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00456] arginyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.596692 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCTCT TCCGTCGCTT TTCCGACCAT ATTGGCGCCG CGCTCGATGC GCTCGCTGCC
CGCGACGCCA TTCCCGCGGG GCTCGACCGT TCGGCGGTCA GCGTCGAGCC GCCGCGCGAT
GCGGCGCACG GTGACATTGC GACAAATGCC GCCATGGTCC TCGCCAAGTC CGCAGGCATG
AATCCGCGGG CGCTTGCCGA CTTGCTCGCC GTCGAGCTTG GTGCGCTCGA CGAGGTCGTT
GAGGCGGGCG TTGCGGGGCC GGGCTTCATC AATCTGCGCC TGGCCGACGA CAGCTGGCGC
GAGGAGCTTG CGCTGATCCA CGACCTGCGC GGCGATTACG GCCGCTCGAC GATGGGGCAG
GGGCGGCGCG TCAATGTCGA ATATGTCTCG GCCAACCCCA CGGGTCCGAT GCACGTCGGC
CATTGCCGCG GGGCGGTGGT GGGCGACGCG CTTGCCGCGC TGCTCGAATA TGCGGGGCAT
GAGGTGATCC GCGAATATTA TGTCAACGAC GCGGGTGCGC AGGTCGATGT CCTCGCGCGT
TCGGTTCACA TGCGTTATCG CGAGGCGCTC GGCGAGGAAG TCGGCGCGAT TCCCGAGGGA
CTTTATCCGG GCGACTATCT GATTCCCGTT GGCGAAAAGC TGGCCGCCGA GCATGGCGAC
CGCTTCGCTG CCGCCCCGGA GAGCGCATGG CTTGCCCTCT TCCGCGCCGA AGCTGTCGGC
GCGATGATGG ACATGATCCG CGCCGACCTC GCCAAATTGG GCATCCATCA TGACATTTTT
TCGTCCGAGG CCGAGCTTCA GGCGGCGGGA AAGCCGGCCG CGGCTGAAAA ATTGCTTCGC
GAACAGGGGC TTGTCTATGA CGGCATTCTT GAAGCGCCAA AGGGCGAAAC GCCCGAGGAT
TGGGAACCGG TCGAGTTGCC GCTGTTCCGT TCGACGCAGT TTGGCGATGA TCAGGATCGC
CCGATCAGGA AGTCGGACGG CAGCTGGACC TATTTCGGTG CCGACCTCGC CTATCATTTC
CAGAAGAGCG AGACGGCCGA CGAGCTGATC GACATCTGGG GCGCCGACCA TGCCGGGACG
GTCAAGCGGA TCAAGGCCGC GGTCGCGGCG CTGACCGGCG GCAAGACCCG TTTCGACGTC
AAGCTCGTGC AGATGGTGCG GCTGCTCAAA AATGGCGAAC CGTTCAAAAT GTCGAAGCGC
GCGGGCAATT TCGTCACGCT CGCCGACGTG GTCGACGAGG TCGGCAAGGA TGCGGTGCGC
TTTACCATGC TGACGCGCAA GGCTGACGCG CAGATGGACT TCGATTTTGC CAGGGTCGTC
GAGGCGTCGC GCGACAATCC CGTCTGGTAT CTGCAATATG CCAATGCGCG GATCTCGCGG
CTGCGCAGGA AGGCGGCGGA TGCGGGGATC GTGCTTCCGG CCCCGGCGCC CGAGCGGCTG
CGCGCAAATG AACTGGCGCT CGTCAAGCTG CTCGCGCAAT TCCCCCGGAT CGTAGAGGCG
GCCGCCTTTG CGCGCGAGCC GCACCGGATT GCTTTCTATC TGGCCGATGT CGCGGCGGCC
TTTCACGCCT GGTATAATCT GGGCAACGAC GATTCTGCGG CGCGCATCGT GCTCGACAAT
GACCCCGAAT TGACTGCGAC GCGCCTTTAT CTGGCCGACG GAATCGGGCA GATCATTCGC
AACGGGCTGC AGCTCATGGG GGTTGAGGCA CTCGAGGAGA TGGTTTGA
|
|---|
| Protein sequence | MTLFRRFSDH IGAALDALAA RDAIPAGLDR SAVSVEPPRD AAHGDIATNA AMVLAKSAGM
NPRALADLLA VELGALDEVV EAGVAGPGFI NLRLADDSWR EELALIHDLR GDYGRSTMGQ
GRRVNVEYVS ANPTGPMHVG HCRGAVVGDA LAALLEYAGH EVIREYYVND AGAQVDVLAR
SVHMRYREAL GEEVGAIPEG LYPGDYLIPV GEKLAAEHGD RFAAAPESAW LALFRAEAVG
AMMDMIRADL AKLGIHHDIF SSEAELQAAG KPAAAEKLLR EQGLVYDGIL EAPKGETPED
WEPVELPLFR STQFGDDQDR PIRKSDGSWT YFGADLAYHF QKSETADELI DIWGADHAGT
VKRIKAAVAA LTGGKTRFDV KLVQMVRLLK NGEPFKMSKR AGNFVTLADV VDEVGKDAVR
FTMLTRKADA QMDFDFARVV EASRDNPVWY LQYANARISR LRRKAADAGI VLPAPAPERL
RANELALVKL LAQFPRIVEA AAFAREPHRI AFYLADVAAA FHAWYNLGND DSAARIVLDN
DPELTATRLY LADGIGQIIR NGLQLMGVEA LEEMV
|
|---|
| |