| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1130 |
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| Symbol | |
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| ID | 4081490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1169026 |
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| End bp | 1170063 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638009491 |
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| Product | Flp pilus assembly CpaB |
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| Protein accession | YP_616179 |
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| Protein GI | 103486618 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0287562 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.522315 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACGC GAAAGATTAT GCTGATCGTC GGCGCGCTGG TGATTGCCAT CGGCGCGGCA
TTCGGGGTCA ACTATATGAT GCGCGGAGCG GGGGCTCCCG CCGCACGGGC GGCCGCGGCG
CCCGAGATCA CGGGACCGAT GATCCTGGTC GCGACGAGGC AATTGCCCGT CGGCACGATC
GTCGGGCCGG ACAGTTTCCG GTTCCAGCCC TGGCCAAAAG ATCTCGTCGA GAACGCCTAT
TTCGTGAAGG AAAAAACCGA CGTGAACACG TTGGTCGGTA CCGTCGTGCG CCATCCGATC
ACGGCAGGAC AGCCGCTCAC GCAGGGTGCC CTCGTCCATC CCAACGATCG CGGCTTCCTT
GCCGCGGCGC TCGGGCCCGG TATGCGGGCG ATCACCGTCA AGGTGTCGCA GGAACAGGGC
GTCGCGGGTT TCGTCTTTCC CGGCGACCGC GTCGACGTGG TGCTGACGCA GACGATCGAG
GTCGAGGAAG GCAGCACCTA TCCCGACGAC CAGATCTTCA CCGCCGAGAC CATCGTTCGC
AACATCCGCG TGCTGGCAAC CGACCAGCGC TATGACGCAG AGGACGAGAC GGGCAAGACG
CCGGTGCGCA CCTTCGGTTC GGTGACGCTC GAAGCGACGC CGGAGATTGC CGAAAAAATC
GCCGTCGCAC AGGGCATGGG CCGCCTGTCG CTCGCGCTCC GCCCGCTGGC CGAAAGCGCC
GGCGAACTCG ACGCCGCGAT CGCTTCGGGT GAAATCAACG TTCCGGCTTC GGGGGGCACC
GCTGCCGAAA GGAAGATGCT GGCGCAGGCC GCCGCGCGTC CGGTTGCCAG CCGTTCGTCG
GCGACCACCG GTGGCGACGT GTCGCGCTTC TGGATCCCGG TACGCGGGCG CGTCACTGCG
CCGCGTCCGC AGCAGGCAGA CAACAGGGGT GGTTATGCGC CGGCCAATGA CGGTCGCGGA
GTGTCCGCGC CGACCGGCCC GGTCGTGCGC GTGACCCGCG GCGACAAGAT GACCGAAGTT
CCGGTTGGGG GTAAGTAA
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| Protein sequence | MDTRKIMLIV GALVIAIGAA FGVNYMMRGA GAPAARAAAA PEITGPMILV ATRQLPVGTI
VGPDSFRFQP WPKDLVENAY FVKEKTDVNT LVGTVVRHPI TAGQPLTQGA LVHPNDRGFL
AAALGPGMRA ITVKVSQEQG VAGFVFPGDR VDVVLTQTIE VEEGSTYPDD QIFTAETIVR
NIRVLATDQR YDAEDETGKT PVRTFGSVTL EATPEIAEKI AVAQGMGRLS LALRPLAESA
GELDAAIASG EINVPASGGT AAERKMLAQA AARPVASRSS ATTGGDVSRF WIPVRGRVTA
PRPQQADNRG GYAPANDGRG VSAPTGPVVR VTRGDKMTEV PVGGK
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