Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1114 |
Symbol | |
ID | 4082052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1149569 |
End bp | 1150699 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638009475 |
Product | spermidine/putrescine ABC transporter ATP-binding subunit |
Protein accession | YP_616163 |
Protein GI | 103486602 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.188638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAC CCGCCCAACC GATCATCCAG ATCCAGAACG TCTCGAAACG CTTCGGCAAG GTCACGGCGG TCGACAATGT CAGCCTCGAC ATCAACGCGG GCGAGTTCTT CGTGCTGCTC GGCCCCTCGG GCTGCGGCAA AACGACCTTG CTGCGGATGA TCGCGGGGTT CGAACTGCCG AGCGAGGGTC GCATATTGAT CGACGGGCAG GATATGGCGG GCATCCCGCC GAACAAGCGC CCGGTGAATA TGGTGTTCCA GAGCTATGCG GTGTTTCCGC ACATGAGCGT CGCCGACAAT GTCGCTTACG GACTCAGGAT CGCAGGCGTG AAGGGCGGCG AGGTCCGAGA CCGCGTTGCC GAAGCGCTCG CGCTGGTCAA GCTCAGCGGA TTCGAGGGCC GGATGCCCGA CCAGATGTCG GGCGGGCAGC GCCAGCGCGT CGCACTCGCG CGAAGCCTGG TGATGCGGCC CAAGGTGCTG TTGCTCGACG AACCGCTCTC GGCGCTCGAT GCGAAGTTGC GCGCGCAGAT GCAGTTCGAG CTGTCGGAGC TGCAGGAAAA GGTCGGCATC ACCTTCGTCA CCGTGACGCA CGATCAGGAC GAGGCGTTGT CGATGGCGTG CCGGATCGCG GTGATCAACA AGGGCGACGT CGCGCAGCTC GCCACGCCGT CGGACCTTTA CGAATATCCC GCCAACCGCT TCGTCGCCGA TTTCGTCGGG TCGGTGAACA TCTTCGAAGG CAAGCTGACG CTCGATGAGC CTGACAAGGC CGCGGTCGAC TGTCCCGGCC TCGGCAAGGT CTATCTCAAC CATGGGGTGA CAGGACCGCA TGGCGCCGAC GTGTGGGTCG CGCTTCGGCC GGAGAAAATC TACCTCCACG TCCCCGGCGC CGGCAAGGCG GTGCGCGCCG CGGCGGAGGA TGCCCCCGAC GGCCACAATT TCGCGCGCGG GACGATCAAG GGCATGTCCT ACCTCGGCGA CATCACGCTG TTCGAGATCG AACTGGACAG CGGCGCACGC CTCCGCGTCT CGCGCCCCAA TCTGTCGCGC CACGACCAGG AGGATTTCAC CTGGGACGAC AGGGTGTCGA TGCACTGGCG CGCCGACAGC CCGGTGGTGT TGCTGGGATA A
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Protein sequence | MTEPAQPIIQ IQNVSKRFGK VTAVDNVSLD INAGEFFVLL GPSGCGKTTL LRMIAGFELP SEGRILIDGQ DMAGIPPNKR PVNMVFQSYA VFPHMSVADN VAYGLRIAGV KGGEVRDRVA EALALVKLSG FEGRMPDQMS GGQRQRVALA RSLVMRPKVL LLDEPLSALD AKLRAQMQFE LSELQEKVGI TFVTVTHDQD EALSMACRIA VINKGDVAQL ATPSDLYEYP ANRFVADFVG SVNIFEGKLT LDEPDKAAVD CPGLGKVYLN HGVTGPHGAD VWVALRPEKI YLHVPGAGKA VRAAAEDAPD GHNFARGTIK GMSYLGDITL FEIELDSGAR LRVSRPNLSR HDQEDFTWDD RVSMHWRADS PVVLLG
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