Gene Sala_1113 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1113 
Symbol 
ID4082051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1148501 
End bp1149436 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content65% 
IMG OID638009474 
Producthypothetical protein 
Protein accessionYP_616162 
Protein GI103486601 
COG category[S] Function unknown 
COG ID[COG2354] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCCG GCCTCTTTGC CCTGCTCGAC GACGTTGCCA CCATTGCCAA GGTTGCCGCG 
GCGAGCATCG ACGACATCGG TGCCGCAGCG TCGAAAGCGG GGGTCAAGGC CGCGGGGGTG
GTGGTCGACG ACGCCGCGGT GACGCCGCGC TATGTGACCG GCTTTCAGCC GAACCGCGAA
CTGCCGATCA TCTGGCGCAT CGCCAAGGGG TCGATGTTCA ACAAGCTGGT GCTGATCCTG
CCCGCGCTGC TGCTGCTGTC GGCGGTGGCG CAATGGGCGA TCACGCCGCT GCTGATGGTC
GGCGGCGCCT ATCTGTGTTT CGAGGGCGCC GAGAAGGTCT GGCATTCGCT CGCCGCCGAC
AAGCACAGCC TGGCCGAAGA AGCGGCTACC GTGATCGATC CGAACCATGA GGAGGTCATG
GTCAAGGGCG CGATCCGCAC CGACTTCATC CTGTCGGCCG AAATCATGGT GATCGCCCTC
AACGAGGTGC TCGACGAAGC GATGCTGATG CGTACGGCAA CGCTGGTTGT TGTCGCCATC
GCAATCACGG TTGCGGTTTA TGGCGTTGTC GGGCTGATCG TGAAGATGGA CGACATCGGG
CTGCACATGG CCAGGGAAGG GCATAACGCC CGGCGCGCGA TCGGGCGCGG ACTTGTCGCT
TTTATGCCCA AGCTGCTCGC CACGCTGGCG ACGGTCGGCA CCGCGGCGAT GCTGTGGGTC
GGCGGCCAGA TTTTCCTCCA CGGCCTCGAC GAATATCATA TCGGCAATCT GGGCCACGGC
CTGCACGATT TTGCGTATTC GGTCGCGGGC GGATTGCCCG GCGCGGGTGT GTGGGAATGG
CTGATCAATG CCGGCGGCGC GGGCGTGTTC GGCCTGCTGC TGGGCGGAGT GATCGTGGCG
GCACTGCATC TGGTGCCGGG AAAGAAGGAG CACTAA
 
Protein sequence
MPSGLFALLD DVATIAKVAA ASIDDIGAAA SKAGVKAAGV VVDDAAVTPR YVTGFQPNRE 
LPIIWRIAKG SMFNKLVLIL PALLLLSAVA QWAITPLLMV GGAYLCFEGA EKVWHSLAAD
KHSLAEEAAT VIDPNHEEVM VKGAIRTDFI LSAEIMVIAL NEVLDEAMLM RTATLVVVAI
AITVAVYGVV GLIVKMDDIG LHMAREGHNA RRAIGRGLVA FMPKLLATLA TVGTAAMLWV
GGQIFLHGLD EYHIGNLGHG LHDFAYSVAG GLPGAGVWEW LINAGGAGVF GLLLGGVIVA
ALHLVPGKKE H