Gene Sala_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1100 
Symbol 
ID4082038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1130492 
End bp1131373 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content64% 
IMG OID638009462 
Productputative glutathione S-transferase YghU 
Protein accessionYP_616150 
Protein GI103486589 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.346596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CCAGCGAATA TGTGCCGCCG AAAATCTGGA CCTGGGACAA GGAAAGCGGC 
GGGCGTTTCG CCAATATCAA TCGTCCCGTC GCCGGACCGA CGCACGACAG GGACCTGCCC
GTCGGCAGGC ATCCGCTCCA GCTCTATTCG CTCGGCACGC CCAATGGGGT GAAGGTGACG
GTGATGCTGG AGGAACTGCT CGCCGCGGGG CACAGCGGCG CCGAATATGA CGCCTGGCTG
ATCAACATCG GCGAGGGCGA CCAGTTTTCG AGCGGTTTCG TCGCGATCAA TCCGAACAGC
AAGATCCCCG CGCTCGTCGA CCGCAGCGGT GCCGAGCCGA TCCGCGTCTT TGAATCGGGC
GCGATCCTGA TTCATCTGGC CGAAAAGTTC GGCGCCTTCC TGCCGACCGA CACCGCCGGG
CGCGCCGAAA CGCTGTCGTG GCTGATGTGG CAGATGGGCA GCGCGCCGTT CCTCGGCGGC
GGCTTCGGGC ACTTCTATGC CTACGCGCCG ACCAAGCAGG AATATCCGAT CAACCGCTAT
GCGATGGAAG TGAAGCGCCA GCTCGACGTG CTCGACCGGC GGCTTGCGGA GAGCGAGTTT
ATCGCCGGCG CCGATTATAC GATCGCCGAC ATGGCGATCT GGCCCTGGTA TGGCGCGCTC
GTGAAGGGGC TGGTCTATGA TGCGGGCGAG TTCCTGCAGG TGCAGGAATA CAAGAATGTC
CTGCGCTGGA CCGACCAGCT TGCCGCGCGC CCGGCGGTGA AGCGCGGGCG GATGGTCAAC
CGCGTGACCG GCGATCCGGC GAGCCAGCTT CGCGAGCGCC ACGACGCATC GGATTTCGAT
CTGCGCACGC AGGACAAGCT CGAAGCGGCG GATAATGTGT GA
 
Protein sequence
MTDTSEYVPP KIWTWDKESG GRFANINRPV AGPTHDRDLP VGRHPLQLYS LGTPNGVKVT 
VMLEELLAAG HSGAEYDAWL INIGEGDQFS SGFVAINPNS KIPALVDRSG AEPIRVFESG
AILIHLAEKF GAFLPTDTAG RAETLSWLMW QMGSAPFLGG GFGHFYAYAP TKQEYPINRY
AMEVKRQLDV LDRRLAESEF IAGADYTIAD MAIWPWYGAL VKGLVYDAGE FLQVQEYKNV
LRWTDQLAAR PAVKRGRMVN RVTGDPASQL RERHDASDFD LRTQDKLEAA DNV