Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1100 |
Symbol | |
ID | 4082038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1130492 |
End bp | 1131373 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638009462 |
Product | putative glutathione S-transferase YghU |
Protein accession | YP_616150 |
Protein GI | 103486589 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.346596 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACA CCAGCGAATA TGTGCCGCCG AAAATCTGGA CCTGGGACAA GGAAAGCGGC GGGCGTTTCG CCAATATCAA TCGTCCCGTC GCCGGACCGA CGCACGACAG GGACCTGCCC GTCGGCAGGC ATCCGCTCCA GCTCTATTCG CTCGGCACGC CCAATGGGGT GAAGGTGACG GTGATGCTGG AGGAACTGCT CGCCGCGGGG CACAGCGGCG CCGAATATGA CGCCTGGCTG ATCAACATCG GCGAGGGCGA CCAGTTTTCG AGCGGTTTCG TCGCGATCAA TCCGAACAGC AAGATCCCCG CGCTCGTCGA CCGCAGCGGT GCCGAGCCGA TCCGCGTCTT TGAATCGGGC GCGATCCTGA TTCATCTGGC CGAAAAGTTC GGCGCCTTCC TGCCGACCGA CACCGCCGGG CGCGCCGAAA CGCTGTCGTG GCTGATGTGG CAGATGGGCA GCGCGCCGTT CCTCGGCGGC GGCTTCGGGC ACTTCTATGC CTACGCGCCG ACCAAGCAGG AATATCCGAT CAACCGCTAT GCGATGGAAG TGAAGCGCCA GCTCGACGTG CTCGACCGGC GGCTTGCGGA GAGCGAGTTT ATCGCCGGCG CCGATTATAC GATCGCCGAC ATGGCGATCT GGCCCTGGTA TGGCGCGCTC GTGAAGGGGC TGGTCTATGA TGCGGGCGAG TTCCTGCAGG TGCAGGAATA CAAGAATGTC CTGCGCTGGA CCGACCAGCT TGCCGCGCGC CCGGCGGTGA AGCGCGGGCG GATGGTCAAC CGCGTGACCG GCGATCCGGC GAGCCAGCTT CGCGAGCGCC ACGACGCATC GGATTTCGAT CTGCGCACGC AGGACAAGCT CGAAGCGGCG GATAATGTGT GA
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Protein sequence | MTDTSEYVPP KIWTWDKESG GRFANINRPV AGPTHDRDLP VGRHPLQLYS LGTPNGVKVT VMLEELLAAG HSGAEYDAWL INIGEGDQFS SGFVAINPNS KIPALVDRSG AEPIRVFESG AILIHLAEKF GAFLPTDTAG RAETLSWLMW QMGSAPFLGG GFGHFYAYAP TKQEYPINRY AMEVKRQLDV LDRRLAESEF IAGADYTIAD MAIWPWYGAL VKGLVYDAGE FLQVQEYKNV LRWTDQLAAR PAVKRGRMVN RVTGDPASQL RERHDASDFD LRTQDKLEAA DNV
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