Gene Sala_1096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1096 
Symbol 
ID4081571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1124446 
End bp1124820 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content63% 
IMG OID638009457 
Producthemimethylated DNA-binding region 
Protein accessionYP_616146 
Protein GI103486585 
COG category[S] Function unknown 
COG ID[COG3785] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02097] hemimethylated DNA binding domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCCG AATCCGGCCC CGAAACCCCG ATCACGCCCG TGACCCCGCT GGTCGCCCGC 
GCGCGTTTCG CGCCCGGCGA CATCGTGCGG CACCGCATGT TCGACTTTCG CGGCGTCGTG
TTCGACATCG ACCCGGTCTT TGCGAACAGC GACGAATGGT ATGAAGCGAT CCCCGAGGAG
ATCCGTCCGG CGAAGGAGCA GCCTTATTAC CACCTGCTCG CCGAAAATGG CGATTCATCC
TATATCGCCT ATGTCAGTCA GCAGAATCTG GTCGCCGACG GGGACGGCGG GCCGATCGAC
CATCCGCAGA TCGAAACGAT GTTCGACGGG ATGGAACGGG GACGTTACCG GGTGCGCGCC
ATCCATCGCC ATTGA
 
Protein sequence
MTPESGPETP ITPVTPLVAR ARFAPGDIVR HRMFDFRGVV FDIDPVFANS DEWYEAIPEE 
IRPAKEQPYY HLLAENGDSS YIAYVSQQNL VADGDGGPID HPQIETMFDG MERGRYRVRA
IHRH