Gene Sala_1094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1094 
Symbol 
ID4081569 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1122753 
End bp1123445 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content70% 
IMG OID638009455 
ProductGcrA cell cycle regulator 
Protein accessionYP_616144 
Protein GI103486583 
COG category[S] Function unknown 
COG ID[COG5352] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATGGA CCGATGAGCG CATCGAGCAA TTGCGCAGCA TGTGGGAAAA GGGCCTGACC 
GCCAGCCAGA TCGCCGACGA ACTCGGCGGG GTCAGCCGCA ATGCCGTGAT CGGCAAGGCG
CACCGGCTGG GCCTGAAATC GCGCCCCTCG CCCGTCAAGG CGACCGAGAA GATGGCAAAG
CCCGCGAAAA CGGCAGCCCC CACTGCGGCG AAACCTGCGC CCGCCGCGAC GGCGGCGCGA
CCCACCGCAC CCGCCACGCC GCGCCCGGCA TCGACTGTTC CGCGTCCCGA ACCCAAGCCT
GCGGCCGAGG CTCCGCACAT CGAGAATGCC GCCGCCGCGC CGACGAAACC GGAAGCGCCG
CGGATCGTGT CGATCGGCCC CGGCGGCTTT ATCCGTCAAG GCCCCGGCGA TCAGCAGGCG
CCGATCCCGC CCGCACCGCC GCGTCGGCTG GTGCCCGCCA AGCCGAGCCC GGAAATCGCC
GACAAGACGA GCCTGCTCGA CCTCAACGAC CGTATCTGCC GCTGGCCGAT GGGGCATCCG
GGCGAGCCCG ATTTCCACTT CTGCGGCGAA GCGGTGAACC CCGGCTTTCC CTATTGTGTC
GAACATTGCG GCCGCGCCTA TCAGGCGCAA TTGCCGCGCG GCACGCGCCG TCCGCCCCCG
CCCCCGCCCT TCGGTGGTCC CCGGGTTCGT TAA
 
Protein sequence
MSWTDERIEQ LRSMWEKGLT ASQIADELGG VSRNAVIGKA HRLGLKSRPS PVKATEKMAK 
PAKTAAPTAA KPAPAATAAR PTAPATPRPA STVPRPEPKP AAEAPHIENA AAAPTKPEAP
RIVSIGPGGF IRQGPGDQQA PIPPAPPRRL VPAKPSPEIA DKTSLLDLND RICRWPMGHP
GEPDFHFCGE AVNPGFPYCV EHCGRAYQAQ LPRGTRRPPP PPPFGGPRVR