| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1085 |
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| Symbol | |
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| ID | 4081560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1114103 |
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| End bp | 1115149 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638009446 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_616135 |
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| Protein GI | 103486574 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATATCC TGTTGCTCGC TGGCGACGGC ATCGGTCCGG AAATCATGGC GGAAGCCGAG
AAGGTCATCG CGGCGCTCGC ACTCCCCGTC GATCTGGATC GCGCGCTTGT GGGCGGTGCG
GCCTGTGCGG CGACCGGCCA TCCGCTGCCC GCGGAAACGC TGGCGAAGGC GAAGGCCGCC
GATGCGATCC TGTTCGGTGC CGTTGGCGAC CCGCGCTTCG ACAATGTGGA GCGCCATTTG
CGGCCCGAGC AGGCGATCCT TGGCCTGCGC GCCGAGCTTG GCCTGTTCGC CAACCTGCGC
CCCGCAAAGC TGTTTTCCGG GCTGGAGGAT AGTTCGGCGC TGCGCCCCGA AGTCGCGTCG
GCGATCGACC TGCTGATCGT CCGCGAGCTT AATGGCGACG TCTATTTCGG CGAAAAAGGC
ACGCGCACGA CCGCCAGCGG CGAACGGCAG GGCTATGACA TCATGTCGTA CAGCGAAAGC
GAGGTGCGGC GCATCGCGCA TGTCGCGTTC AAGGCGGCCG CTGGACGGAA CAAGCGGCTC
TGCTCGGTCG ACAAGGCGAA TGTGCTCGAA ACCTCGCAGC TGTGGCGCGA CGTCGTGATC
GAAGTGGCCG CCGACTATCC CGACGTGGCG CTTGCCCACA TGTATGTCGA CAATGCCGCG
ATGCAGCTGG TACGCAATCC GGGGCAGTTC GATGTCGTCG TCACCGGCAA TCTGTTCGGC
GATATCCTTT CGGATCAGGC GTCGATGTGC GTCGGCTCGA TCGGGCTGCT CGCGTCGGCG
TCGCTGGGCG ACGGCACGCG GGGGCTGTAT GAGCCGATCC ACGGCAGCGC GCCCGACATT
GCGGGGAAGG GCATTGCCAA TCCGCTGGCG ATGATCTTGT CGCTTGCGAT GCTGCTCCGC
CATTCGGGGG GCGACGAGGC CAATGCGGCG CGGATCGAGG CAGCGGTGGC ACAGATACTC
GCCGACGGCT GCCGCGGCGC CGACCTGGGC GGAACGATGG GCACGGCGGC CTTGGGCGAT
GCGGTCGTGG CGGCTTTGAA CGGATAG
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| Protein sequence | MNILLLAGDG IGPEIMAEAE KVIAALALPV DLDRALVGGA ACAATGHPLP AETLAKAKAA
DAILFGAVGD PRFDNVERHL RPEQAILGLR AELGLFANLR PAKLFSGLED SSALRPEVAS
AIDLLIVREL NGDVYFGEKG TRTTASGERQ GYDIMSYSES EVRRIAHVAF KAAAGRNKRL
CSVDKANVLE TSQLWRDVVI EVAADYPDVA LAHMYVDNAA MQLVRNPGQF DVVVTGNLFG
DILSDQASMC VGSIGLLASA SLGDGTRGLY EPIHGSAPDI AGKGIANPLA MILSLAMLLR
HSGGDEANAA RIEAAVAQIL ADGCRGADLG GTMGTAALGD AVVAALNG
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