Gene Sala_1074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1074 
Symbol 
ID4082339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1106699 
End bp1107103 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content69% 
IMG OID638009435 
Producthypothetical protein 
Protein accessionYP_616124 
Protein GI103486563 
COG category[S] Function unknown 
COG ID[COG3784] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGTT TGAAAATGGG AAAGCCGACC GGTTGGGCGC TGGCCGCCGT TGCCGCGACC 
GCGGCGGTTG CGCTCGCCGT GCCGTCGGCG ATGGCACAGC GCGACCCGGC CTATGCTGCG
GCGCGCGCCG CGGGGCAGAT CGGCGAACAG CCCGACGGCT ATCTGGGTTT CGTCACCGCG
CCGACGCCGG CGATCCGCGC GCTGGTGCAG GACATCAATA TCAAGCGCAA GGCCGCCTAT
ACCGAACGCG CCCAGGCGAC GGGCAGCACG GTCGAGCAAT TCGCCTTCAC GAGCGGCTGC
AACCTCATCG CGAGCACCAG GCCCGGCGAA AAATACCAGA CGCCCGGCGG CGTGTGGAAG
ACGCGGGATG AAGGCCCGCC CGAGCGCGAC GCCCGCTGCC CATAA
 
Protein sequence
MMRLKMGKPT GWALAAVAAT AAVALAVPSA MAQRDPAYAA ARAAGQIGEQ PDGYLGFVTA 
PTPAIRALVQ DINIKRKAAY TERAQATGST VEQFAFTSGC NLIASTRPGE KYQTPGGVWK
TRDEGPPERD ARCP