Gene Sala_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1071 
Symbol 
ID4082336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1103376 
End bp1103789 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content67% 
IMG OID638009432 
Producthypothetical protein 
Protein accessionYP_616121 
Protein GI103486560 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.107343 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCGG GTGCGGTGGC TGCGCTGGCG GCGGCAACAT GGCTGGCGCG CGAGCCGATC 
GCGGACGAGT TCATTCGCAG CCAGCTTGAA AGCCGCGCCG TTCCCGCGCA ATATCGCATC
GACGCGATCG GTTTTCGCAG CGAAAGACTG TCGAACATCG TGATCGGCGA TCCCGCACGC
CCCGACCTGA CCGCCGCAAC GGTCGAGGTG CTGCTCGGCT ATGGCCTGGC TGGCCCCTAT
GTGTCGGAGA TCCGCGCCGA AGGCGTGCGC CTCCATGGTC GTTTTGTCGA TGGCCGCCTG
TCGTTCGGGG TGCTCGACAG GTTCCGCGAC CCCGAAAGCA CCGACCCCTT TGCCTTGCCC
GACATGGCCG TGATCTTGCG CGACGCGCGC GCGCGTCGAG ACGCCGTGGG GTGA
 
Protein sequence
MTAGAVAALA AATWLAREPI ADEFIRSQLE SRAVPAQYRI DAIGFRSERL SNIVIGDPAR 
PDLTAATVEV LLGYGLAGPY VSEIRAEGVR LHGRFVDGRL SFGVLDRFRD PESTDPFALP
DMAVILRDAR ARRDAVG