Gene Sala_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1062 
Symbol 
ID4082327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1095255 
End bp1096106 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content65% 
IMG OID638009423 
Productacetyl-CoA carboxylase, carboxyl transferase, beta subunit 
Protein accessionYP_616112 
Protein GI103486551 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.654734 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGC TCGACCGCGT TCGCAACGCC CTGCCCTTCA CCGCCAAGCG CGATACCGCC 
GACAATCTGT GGCACAAATG CCGCCAGTGC CAGCAGATGG TGTTCGTCAA GGAATGGGAG
GATAATCTCA ACGTCTGCCC GCGCTGCGAC CATCACGACC GTATCGGCGC GAAGGAACGC
TTTGCGCAGC TGTTCGACGG CGGGCTGCAC GAAATGATCG CCGCCCCCGC GGCGCCTGAG
GATCCGCTCA AGTTCCGCGA CACCAAAAAA TATGTCGACC GCATCAAGGC GGCGCGCGCG
CAGACCGGCG ACCGCGACGC CTATCAGAAC GCCTTTGGCC GCATTTCGGG CCAGGGCGTC
GTGATCGGCG TCCAGGATTT CGCCTTCATG GGCGGTTCGA TGGGCGTTGC CGTGGGCGAA
GCCTTCGTCG CGGGCGTTGA GGACGCGATC CGGCGCGGCG TTCCCTATAT CGCGATCACC
GCCGCGGGCG GCGCACGGAT GCAGGAAGGC ACTCTGTCGC TGATGCAGAT GCCGCGCGCG
ACGGTCGCGC TCGCCCGCCT GCGCCGCGCG GGTCTGCCCT ATATCGTGCT GCTCACCGAT
CCGACGACCG GCGGCGTCAC CGCCAGCTAT GCGATGCTCG GCGATGTGCA GATCGCCGAG
CCAAAGGCGC TGATCGGCTT CGCGGGCCAG CGCGTGATCG AGAATACGAT CCGCGAAAAG
CTGCCCGAAG GCTTCCAGCG CGCCGAATAT CTGCTCGACC ACGGGATGAT CGACATGGTC
GTGCATCGCA AGGATTTGCC GGAGACGCTG GGCAGGCTGA TCGGCTATCT GGCGCCGGAG
AAGGCGGCTT AA
 
Protein sequence
MSWLDRVRNA LPFTAKRDTA DNLWHKCRQC QQMVFVKEWE DNLNVCPRCD HHDRIGAKER 
FAQLFDGGLH EMIAAPAAPE DPLKFRDTKK YVDRIKAARA QTGDRDAYQN AFGRISGQGV
VIGVQDFAFM GGSMGVAVGE AFVAGVEDAI RRGVPYIAIT AAGGARMQEG TLSLMQMPRA
TVALARLRRA GLPYIVLLTD PTTGGVTASY AMLGDVQIAE PKALIGFAGQ RVIENTIREK
LPEGFQRAEY LLDHGMIDMV VHRKDLPETL GRLIGYLAPE KAA