| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1060 |
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| Symbol | |
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| ID | 4082325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1092389 |
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| End bp | 1093792 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638009421 |
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| Product | major facilitator transporter |
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| Protein accession | YP_616110 |
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| Protein GI | 103486549 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0118336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCGCAGG ATGTGACAAC GGCGCCGCCG CAAGACTGGT GGCACAGCTT CCGCCCCTAT
CTGGAGCGTG CGCCGCTCGC GGCGTTGCTG CTCGGCATAT CATCCGGTTT TCCCTACGCC
ATGATCGGCG CGACGCTCAC GACGCGGCTG TCGCAGGACG GATTCCAGAA ATCTTCGATC
ACCGCCTTTT CACTCGCTTT CCTCGTCTAT AATTTCAAAC CGCTCTGGGC GTGGCTTGTC
GACGCGGTGC GCCTGCCGGG CGCGCGGTTC GTCGGCCAGC GCGTCAGCTG GATGATCCTT
GCCGCCGCGC TTGTGATATT GGCGGTCGCA AACCTCGCGA TGGTCGACCC CGCGCGTGTC
GGCCAGTCGC CCGTCGGGCA GATGATGATC TGGCTCGGCC TCGGCCGCGA GGGCGAATTT
GCTGCCCTTT TCGAAATGGC GATGGGGGCG GTGCTCGTCG GACTCGCCGG CGCGACGTTC
GACATCGTGA TCGACGCCTA TCGGATCGAG ATATTGAAGC CCGAACAGCT TGGCGTCGGG
TCGGGCATGT CGCAATATGG TTGGCGCATC GGATCGGCGG GGGCGGGCGC CATCGCGCTG
TTCGTGGCGG CACGCCAAGG CTGGGAAGCG GCGTATCTGG TTTGCGCGCT GCTCGCGCTA
CCGGCGGTGC TTGCGGCTCT GTGGGTCGGC GAGCCCGAGC GCCACCGCGA GGCGGTGCAG
CGCGAGGGAC GACCGGGCAT CATCGCGGGT ATCGTCGGCC CCTTCGCCGA ATTTTTCAGC
CGCCACGGCG CGTGGCTGGT GCTGCTGTTT ATCCTGCTCC ACAAAATCGG CGACACGCTC
GCCAATCTGA CGCTAAGGCT GCTGCTCGAC GATCTGGGGT TCAGCAATGA CGAGATTGCC
ATTTATGACG TCGGGATCGG CTTCTGGGCC TATCTGATCG GCATTTTTAT CGGCGGCGCT
CTCTATGCGC GGCTCGGCAT GAAGAAATCG GTGCTGCTCA GCCTCATCCT GATGGCGATC
AGCAATTTCA GCTTCGCGCT GCTCGCCGCC GCCGGGCACA GCAATTGGGG TCTCGCAGGC
GCTATCGCGT TCGAAAATAT CGCCAGCGGG ATCGGGGGCG TTGTCGTCGT CGCCTATTTC
TCGGCGCTAT GCGACCTTCG CTTTACCGCC GCCCATTATG CACTCATCAG TTCGGCGGCC
AGTATCGTCG GTCGCTTTCT GACCGGCACG ACAGCGGGCG CGATGATGGA TGCGTTCGGC
AATGTGACTT TCTATCTGCT CACCGTGGCG GCGGCTTTGC CGGGCATCAT CCTTTTCTGG
CTGATGATGC GCAGCGGGCT GGTCGACCTG TCGGTGGGCA CGGCGGGCAG GGCAGGAAGC
GCTGCGAAAG AGCCGGCCGC CTGA
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| Protein sequence | MPQDVTTAPP QDWWHSFRPY LERAPLAALL LGISSGFPYA MIGATLTTRL SQDGFQKSSI
TAFSLAFLVY NFKPLWAWLV DAVRLPGARF VGQRVSWMIL AAALVILAVA NLAMVDPARV
GQSPVGQMMI WLGLGREGEF AALFEMAMGA VLVGLAGATF DIVIDAYRIE ILKPEQLGVG
SGMSQYGWRI GSAGAGAIAL FVAARQGWEA AYLVCALLAL PAVLAALWVG EPERHREAVQ
REGRPGIIAG IVGPFAEFFS RHGAWLVLLF ILLHKIGDTL ANLTLRLLLD DLGFSNDEIA
IYDVGIGFWA YLIGIFIGGA LYARLGMKKS VLLSLILMAI SNFSFALLAA AGHSNWGLAG
AIAFENIASG IGGVVVVAYF SALCDLRFTA AHYALISSAA SIVGRFLTGT TAGAMMDAFG
NVTFYLLTVA AALPGIILFW LMMRSGLVDL SVGTAGRAGS AAKEPAA
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