| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1058 |
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| Symbol | |
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| ID | 4080784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1090825 |
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| End bp | 1091682 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638009419 |
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| Product | pseudouridine synthase, Rsu |
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| Protein accession | YP_616108 |
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| Protein GI | 103486547 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.042394 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACCC GCCGTCCGCC CCGCTCCGCC CCGCGCCCCG GCGCCGACCG CTCTGCCGCA
GCGGCCCCGC GCGGCCGCCG CGCCGCGCGT GCCGACGCGC CGCCGCGCAA GCTTCCCGCC
GACACTGAAC GCGAGGACGG GCCGCAGCGC ATCGCCAAGC TGCTCGCGCG CGCCGGGGTC
GGCTCGCGCC GCGATGTCGA GCGGATGATC GAGGAAGGCC GGATCGCGCT CAACGGCGAA
GTCGTCACCC AGCCCGCGCC GCTCCTCGCG TCGCTTGAAG GGCTGACGGT CGACGGCAAT
CCGGTCGCCA AACCGGTTTC GACGCGCCTC TATCGCTTCC ACAAGCCGGC GGGCTGCCTC
ACGGCGGCGC GCGACCCCAA GGGCCGCAAG ACGATCTATG ACGTGCTGCC CAAGGGATTG
CCGCGGCTGA TGCCGGTCGG CCGGCTCGAC TATAATACCG AGGGGTTGCT GCTGCTCACC
AACGACGGCG CGTTCAAGCG TCAACTCGAA CTGCCCGCGA GCGGGGTCGA GCGCACCTAC
CGCGCCCGTG CCTTTGGCGA CATCAGCCAG GCGCAGCTCG AGGAGCTGGT GATGGGGATC
GAGATCGACG GGATTCGCTA TGGGAAAATC GACGCCAATC TCGAACGCCG CACCGGGCGC
AACCAGTGGA TCGAAATGAC GCTGACCGAA GGCAAGAACC GCGAAGTGCG CCGCGTGCTC
GAACATCTGG GGTTGCAGGT CAGCCGCCTG ATCCGCACCC GCTATGGCGA GTTTACCCTC
GCCGGACTCG ACATGGGCGC GGTCGAGGTC GTGCCGCGCG ACGAATTGTT CAAGTTCCGG
CGGCAACTGG CCAAATGA
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| Protein sequence | MTTRRPPRSA PRPGADRSAA AAPRGRRAAR ADAPPRKLPA DTEREDGPQR IAKLLARAGV
GSRRDVERMI EEGRIALNGE VVTQPAPLLA SLEGLTVDGN PVAKPVSTRL YRFHKPAGCL
TAARDPKGRK TIYDVLPKGL PRLMPVGRLD YNTEGLLLLT NDGAFKRQLE LPASGVERTY
RARAFGDISQ AQLEELVMGI EIDGIRYGKI DANLERRTGR NQWIEMTLTE GKNREVRRVL
EHLGLQVSRL IRTRYGEFTL AGLDMGAVEV VPRDELFKFR RQLAK
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