Gene Sala_1053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1053 
Symbol 
ID4080778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1086847 
End bp1087341 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content64% 
IMG OID638009413 
Producttransposase, IS4 
Protein accessionYP_616103 
Protein GI103486542 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.133687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGCG ATCGACGCCA CCGTAATCCG TGCCCAAGCC CAGGCCGCCG GGGCCAGGGT 
AAAAAGGGGG GCGTTCAAGC CCAGGCTCTG GGCCGCTCAA GAGGCGGGTT CGGGACCAAG
ATCCACGCTG TAGTCGATGC TCTCGGCCTG CCGGTGCGCT TCATGCTCGG CCCCGGCCAG
CAGAACGATA TGGCCCCGGC CTGCGACCTG ATCCGCGGCC TGAAGGCCGA ACACGTGCTG
GCCGACCGCG CCTACGACGC CGATAGCCTG TGCGATCTCA TCACCGAACA AGGCGGCGAA
CCGGTCATTC CGCCCCGCCG CCACCGCAAG GTCCAGCGCA GTTACGACCG CATCGCATAC
AAACAGCGCT GGGGCATCGA GGGCTTCTTC GCCAAACTCA AGCAATGGCG ACGCATCGCC
ACCCGCCATG ACAAACTCGC CGCAAACTTC CTTGGCTTCA TCAAACTCGC AAGCATAATG
TTGTGGCTCA AATGA
 
Protein sequence
MAGDRRHRNP CPSPGRRGQG KKGGVQAQAL GRSRGGFGTK IHAVVDALGL PVRFMLGPGQ 
QNDMAPACDL IRGLKAEHVL ADRAYDADSL CDLITEQGGE PVIPPRRHRK VQRSYDRIAY
KQRWGIEGFF AKLKQWRRIA TRHDKLAANF LGFIKLASIM LWLK