Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1051 |
Symbol | |
ID | 4080776 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1084987 |
End bp | 1086363 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638009411 |
Product | DEAD/DEAH box helicase-like protein |
Protein accession | YP_616101 |
Protein GI | 103486540 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0480198 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTG CCGACCTCGG CCTTTCCGAC GAACTTTTGC GCGCGATCGA CGAGTCGGGC TATAGCGAAC CGACTGCAAT CCAGGCGGGC GCCATCCCCT CTGTCCTGAT GATGCGCGAC ATGATCGGCA TTGCACAGAC GGGAACGGGG AAAACCGCCT CCTTTGTGCT GCCGATGATC GACATATTGG CGCACGGCCG CGCCCGCGCG TTGATGCCGC GTTCGCTGAT CCTCGAGCCG ACGCGCGAAC TGGCGGCGCA GGTCGCCGAA AACTTCGAAA AATACGGCAA GTATCACAAG CTGTCGATGG CGCTGCTGAT CGGCGGCGTG CAGATGGGCG ACCAGATCAA GGCGCTCGAA AAAGGTGTCG ATGTGCTGAT CGCGACGCCG GGGCGGCTGA TGGACCTGTT CGAGCGCGGC AAGATCTTGC TCACCGGCTG CAACCTGCTG GTGATCGACG AGGCCGACCG GATGCTCGAC ATGGGGTTCA TTCCCGACAT CGAGAATATC TGCACCAAGC TGCCTGCCAA TCGCCAGACC CTGCTGTTCT CGGCGACGAT GCCGCCGCCG ATCAAGAAGC TGGCCGACAA GTTCCTGTCG AACCCCAAGA CGATCGAGGT CGCGCGCCCC GCGAGCCGTA ACGAGAATAT CGAGCAGTTC GTGGTCAAGA CGTCCGAACG CGGCAAGCGC GATACGCTGC GCGGGCTGAT CGAGGCCGAG GATCTGTCGA CCGCGATCGT CTTTTGCAAC CGCAAGACCA CCGTGCGCGA GCTGGCGAAA TCGCTCCAGC GCTCCGGCTA CAGGGCCGGC GAGATCCATG GCGACATGGA CCAGTCGAGC CGCATCGCCG AACTCGACCG GTTCAAGGCG GGAACGATCA ACATATTGGT GGCGTCGGAC GTCGCGGCGC GCGGGCTCGA CGTCAAGGGC GTCAGCCATG TGTTCAACTT CGACGCGCCC TGGCATCCCG ACGATTATGT CCACCGCATC GGCCGCACCG GCCGCGCGGG GGCACAAGGG CGTGCTTTCA CATTGGTGAC GCCGTCGGAT GACGAGGCGA TCGACAATAT CCAGAAGCTG ACCGGTTACA ATATCCCCGT CCACGGGACC GCCACGGCCG ACGCCGCCCC GGCGAAGGAC GAGCCGCGCG AGGAGCGCGA ACCGCGCCGC GAAAGCCGTC CGGCCCGTGG TGGACGCGGT CGTGCCAAGC CTGCCGACCC GGACGCGAAA CGCGCGGACG ACAAGCGCAA CGAAGCTCCC AGGAAAAAGG ACGCGGGCCG CAAGCCGCCG CCCGCCGCGC GGCAGGACGA CGATGGCTCC GACGACGGCT GGAATGGCCC GATGCCGGGT TTCCTGTCGG TTGGGTTCGG GAGCTGA
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Protein sequence | MKFADLGLSD ELLRAIDESG YSEPTAIQAG AIPSVLMMRD MIGIAQTGTG KTASFVLPMI DILAHGRARA LMPRSLILEP TRELAAQVAE NFEKYGKYHK LSMALLIGGV QMGDQIKALE KGVDVLIATP GRLMDLFERG KILLTGCNLL VIDEADRMLD MGFIPDIENI CTKLPANRQT LLFSATMPPP IKKLADKFLS NPKTIEVARP ASRNENIEQF VVKTSERGKR DTLRGLIEAE DLSTAIVFCN RKTTVRELAK SLQRSGYRAG EIHGDMDQSS RIAELDRFKA GTINILVASD VAARGLDVKG VSHVFNFDAP WHPDDYVHRI GRTGRAGAQG RAFTLVTPSD DEAIDNIQKL TGYNIPVHGT ATADAAPAKD EPREEREPRR ESRPARGGRG RAKPADPDAK RADDKRNEAP RKKDAGRKPP PAARQDDDGS DDGWNGPMPG FLSVGFGS
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