Gene Sala_1048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1048 
Symbol 
ID4080773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1081853 
End bp1082632 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content61% 
IMG OID638009408 
ProductSapC 
Protein accessionYP_616098 
Protein GI103486537 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0951508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCG CGCCCGCACC TGCCAACCTG CCGCTGTTCT ACAAAGACCT CACCCCGCTT 
TCGAGCGTCG ATCATGCCGA TTTCCACGCG CGCCCGCTCG ACAGCGCCGC GTTCCTGGTC
GGCCAGCACG CGGTCCCGCT GACCTCGGAC GAGTTTGTTT CGGCGTGCCG CTTTTTCCCG
ATCGTCTTCT CGGCTGGCGA CAATCCCGTT CCGCTCGCGC TGATGGGCCT CAACGAAGGC
ATCAATACGT TCGTCGACGA TCAGGGCAAG CTGATCAATC CGGTCTATGT CCCGGCCTAT
ATACGCCGCT ATCCCTTCCT GCTCGCCAAG CTTCAGCCGA ACACCGACGA GCTGTCGCTC
TGTTTCGATC CGACATCGGG CGCAATTGGC AAGTTCGACG AGGGCGACGC GCTGTTCGTC
GACGGCCAGC CGTCGGACCA GGTCAAGGCG GTGCTCGAGT TCTGCAAGAA TTTCGAGGAA
GCCGGCCAGC GCACCGGCAT GTTCATGGAA GAGCTGAAAA AGGCTGACCT GCTGATGGAC
GGCGAAGTCG CGATCCAGCA GGAAGGCAAT GACAAGCCCT ATATCTATCG CGGGTTCCAG
ATGGTGGACG AAAACAAGCT GCGCGAGCTG CGCGGCGATG TGCTGCGCAA GCTGATGCAA
AACGGCATCC TTGGCCTCAT CTTCGCGCAC CTCTTCTCGC TGCAATTGAT GCGCGAAGTC
TTCGCCGAAC AGGTGAAGAG CGGCAAGATG CAACTCGTCA CCGAAGCTCC GGCCGTCTGA
 
Protein sequence
MATAPAPANL PLFYKDLTPL SSVDHADFHA RPLDSAAFLV GQHAVPLTSD EFVSACRFFP 
IVFSAGDNPV PLALMGLNEG INTFVDDQGK LINPVYVPAY IRRYPFLLAK LQPNTDELSL
CFDPTSGAIG KFDEGDALFV DGQPSDQVKA VLEFCKNFEE AGQRTGMFME ELKKADLLMD
GEVAIQQEGN DKPYIYRGFQ MVDENKLREL RGDVLRKLMQ NGILGLIFAH LFSLQLMREV
FAEQVKSGKM QLVTEAPAV