Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1048 |
Symbol | |
ID | 4080773 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1081853 |
End bp | 1082632 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638009408 |
Product | SapC |
Protein accession | YP_616098 |
Protein GI | 103486537 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0951508 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCACCG CGCCCGCACC TGCCAACCTG CCGCTGTTCT ACAAAGACCT CACCCCGCTT TCGAGCGTCG ATCATGCCGA TTTCCACGCG CGCCCGCTCG ACAGCGCCGC GTTCCTGGTC GGCCAGCACG CGGTCCCGCT GACCTCGGAC GAGTTTGTTT CGGCGTGCCG CTTTTTCCCG ATCGTCTTCT CGGCTGGCGA CAATCCCGTT CCGCTCGCGC TGATGGGCCT CAACGAAGGC ATCAATACGT TCGTCGACGA TCAGGGCAAG CTGATCAATC CGGTCTATGT CCCGGCCTAT ATACGCCGCT ATCCCTTCCT GCTCGCCAAG CTTCAGCCGA ACACCGACGA GCTGTCGCTC TGTTTCGATC CGACATCGGG CGCAATTGGC AAGTTCGACG AGGGCGACGC GCTGTTCGTC GACGGCCAGC CGTCGGACCA GGTCAAGGCG GTGCTCGAGT TCTGCAAGAA TTTCGAGGAA GCCGGCCAGC GCACCGGCAT GTTCATGGAA GAGCTGAAAA AGGCTGACCT GCTGATGGAC GGCGAAGTCG CGATCCAGCA GGAAGGCAAT GACAAGCCCT ATATCTATCG CGGGTTCCAG ATGGTGGACG AAAACAAGCT GCGCGAGCTG CGCGGCGATG TGCTGCGCAA GCTGATGCAA AACGGCATCC TTGGCCTCAT CTTCGCGCAC CTCTTCTCGC TGCAATTGAT GCGCGAAGTC TTCGCCGAAC AGGTGAAGAG CGGCAAGATG CAACTCGTCA CCGAAGCTCC GGCCGTCTGA
|
Protein sequence | MATAPAPANL PLFYKDLTPL SSVDHADFHA RPLDSAAFLV GQHAVPLTSD EFVSACRFFP IVFSAGDNPV PLALMGLNEG INTFVDDQGK LINPVYVPAY IRRYPFLLAK LQPNTDELSL CFDPTSGAIG KFDEGDALFV DGQPSDQVKA VLEFCKNFEE AGQRTGMFME ELKKADLLMD GEVAIQQEGN DKPYIYRGFQ MVDENKLREL RGDVLRKLMQ NGILGLIFAH LFSLQLMREV FAEQVKSGKM QLVTEAPAV
|
| |