Gene Sala_1041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1041 
Symbol 
ID4082324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1074350 
End bp1074775 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content62% 
IMG OID638009401 
Producthypothetical protein 
Protein accessionYP_616091 
Protein GI103486530 
COG category[S] Function unknown 
COG ID[COG2947] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.914338 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAAC AATATTGGCT GATGAAATCC GAACCCGACG CCTATGCGTG GGGCCAGCTC 
GTCAAGGACG GCACGGGCAT CTGGGACGGG GTGCGCAATC ACACCGCGAA ACTGAATTTG
ATGGCAATGA AGAAGGGCGA CGAAGCGCTT TTTTATCACA GCAATATCGG CAAGGAATGC
GTCGGGATTA TGGAGATCAC CGAAGAGAGC TTCCCCGACC CGACCGCCGA GGAAGGATCA
CCGTGGGTGG TGGTGCGCGT TGCGCCCGTG CGCGCGCTGA CGCACCCGGT GACGCTGGCG
GCGATCAAGG CCGAGCCGCG ACTGGCCGAC ATGGACCTGA TCCGCCAGTC GCGCCTGTCG
GTCGGACGCG TGACGCCGAC CGAATGGCAG CTGATTTTGA AGATGTCGGA GACGGCGGCG
GGCTGA
 
Protein sequence
MGKQYWLMKS EPDAYAWGQL VKDGTGIWDG VRNHTAKLNL MAMKKGDEAL FYHSNIGKEC 
VGIMEITEES FPDPTAEEGS PWVVVRVAPV RALTHPVTLA AIKAEPRLAD MDLIRQSRLS
VGRVTPTEWQ LILKMSETAA G