Gene Sala_1040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1040 
Symbol 
ID4082323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1073289 
End bp1074218 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content64% 
IMG OID638009400 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_616090 
Protein GI103486529 
COG category[R] General function prediction only 
COG ID[COG3491] Isopenicillin N synthase and related dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.93578 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTG CCGTCCCCGT CATTTCCCTG GCCCTTTCCG CCGACCGGTT TGCCCGTGAT 
TTCGGAGGAT CGTTCGAACG CTTCGGCTTT GCGATGATCA CCGATCACGG CATTGACCTC
ACGCTGATCG ACGAGGCCTG GACCAAGGCC AAGGCGTTTT TCGCGCTGCC GGAAGCAGTC
AAGCGTGCCT ATCATATCCC CGGCGGCGGC GGCGCGCGCG GCTACACACC CTTCGGAACC
GAAATCGCCA AGGGCGCGAA AGAGGTCGAC CTGAAAGAGT TCTGGCATGT CGGGCGCGAC
CTGCCGCCCG GCCACCCGCT TGCCGCGCAA CAGCCGAACA ATGTCTGGCC GGCAGAGATC
GAAGGGTTTC GCGCCGTTTT TGAGAGGCTG TTTGCCGAGT TCGACCGGGT GGGCGGCCAG
CTTTTGTCGG GCATCGCACG CTATCTCGGC CTCGCCCCCG ATTTCTTCGA TGACACGGTG
AAGGACGGCA ACAGCGTCAT GCGCCTGCTT CACTATCCGC CGGTCGAGGC GCCCGCCAAA
GGCATCCGCG CCGAAGCGCA TGAGGACATC AACACCATCA CCCTCCTGCT CGGCGCCGAG
GAAGCGGGGC TCGAGATTCT CGACAAGGAC GGCAGTTGGC TTCCCGTTTC GCCGCCGCCG
GGCGCGATGG CGGTCAATGT CGGCGACATG CTTCAGCGGC TGACGAACAA CCGCCTCCCC
TCGACGACGC ACCGCGTCCG CAACCCCGAC GAAGGCCGCG CCGGCGTCGC GCGCTATTCG
ATGCCCTTCT TCCTGCATTT CCGTTCGGAC TATCTGATCG AGACGCTGGA CAACTGCATC
GACGCCGATC ACCCCGACCT CTACCCGACA CCGATCACCG CCGACGATTA TCTGCAGGAA
CGCCTGCGCG AAATCGGGCT GAAGAAATAG
 
Protein sequence
MTAAVPVISL ALSADRFARD FGGSFERFGF AMITDHGIDL TLIDEAWTKA KAFFALPEAV 
KRAYHIPGGG GARGYTPFGT EIAKGAKEVD LKEFWHVGRD LPPGHPLAAQ QPNNVWPAEI
EGFRAVFERL FAEFDRVGGQ LLSGIARYLG LAPDFFDDTV KDGNSVMRLL HYPPVEAPAK
GIRAEAHEDI NTITLLLGAE EAGLEILDKD GSWLPVSPPP GAMAVNVGDM LQRLTNNRLP
STTHRVRNPD EGRAGVARYS MPFFLHFRSD YLIETLDNCI DADHPDLYPT PITADDYLQE
RLREIGLKK