Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1038 |
Symbol | |
ID | 4082321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1071842 |
End bp | 1072606 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638009398 |
Product | aldolase II superfamily protein |
Protein accession | YP_616088 |
Protein GI | 103486527 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.552674 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.877247 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCACCC AGCTCAAGCG CAACAGCAAA TATAGCGAAG CCGAATGGAC CGCACGGCAG GAACTCGCCG CCTGCTACCG CATCTTTGCG ATGATGCGCT GGGACGAGCT GATCTTCAAC CACATCACGG TGAAGGTGCC CGATCAGGAC GGCGCCTTCC TCATCAACCC CTATGGCATG CACTTCAGCG AGGTCACTGC ATCGAGCCTC ATCAAGATCG ACATCGACGG CAACAAGCTC GACGAGGATA ATCCCTGGCA CGTCAACAAG GCGGGTTTCG TCCAGCACAG CCTGTTCCAC CGCATATTGC CCGACGCGCA CGCGATCATC CACACCCACA CCACCGCGAC GATGGCCGTA TGCGGGCTCG AGGGAGGACT CCAACCGACC AACTTCTATG CCTGCAACTT CATGGGGCAG CTCGCCTATC ATGATTTCGA GGGTGTGACG GTACGCGAGG AAGAGGGCGA GCGGCTGGTC AGGAATCTCG GCGACAAGCG CATCCTGATG CTGCGCAATC ACGGCCCCGT CGTGATGGGC AAATCGCTCA CCGACGCCTT CATCAAATAT TGGGCGCTCC AGCGCGCATG CGAGATCCAG CTCGCGACGA TGAGCATGGG CAAGCCGATC CTTGTCGACG AAGAGGTCAT CAAGGTCCAC CAGCGCGACC TTTATATGGC GGCGATCCCC GGCCAGTCGG GCAAGGCCGA GTTCGACGCG ATGGTACGCA AGGTCGACAA GATCGACACA AGTTGGCGTG ACTAA
|
Protein sequence | MATQLKRNSK YSEAEWTARQ ELAACYRIFA MMRWDELIFN HITVKVPDQD GAFLINPYGM HFSEVTASSL IKIDIDGNKL DEDNPWHVNK AGFVQHSLFH RILPDAHAII HTHTTATMAV CGLEGGLQPT NFYACNFMGQ LAYHDFEGVT VREEEGERLV RNLGDKRILM LRNHGPVVMG KSLTDAFIKY WALQRACEIQ LATMSMGKPI LVDEEVIKVH QRDLYMAAIP GQSGKAEFDA MVRKVDKIDT SWRD
|
| |