Gene Sala_1038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1038 
Symbol 
ID4082321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1071842 
End bp1072606 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content60% 
IMG OID638009398 
Productaldolase II superfamily protein 
Protein accessionYP_616088 
Protein GI103486527 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.552674 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.877247 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCC AGCTCAAGCG CAACAGCAAA TATAGCGAAG CCGAATGGAC CGCACGGCAG 
GAACTCGCCG CCTGCTACCG CATCTTTGCG ATGATGCGCT GGGACGAGCT GATCTTCAAC
CACATCACGG TGAAGGTGCC CGATCAGGAC GGCGCCTTCC TCATCAACCC CTATGGCATG
CACTTCAGCG AGGTCACTGC ATCGAGCCTC ATCAAGATCG ACATCGACGG CAACAAGCTC
GACGAGGATA ATCCCTGGCA CGTCAACAAG GCGGGTTTCG TCCAGCACAG CCTGTTCCAC
CGCATATTGC CCGACGCGCA CGCGATCATC CACACCCACA CCACCGCGAC GATGGCCGTA
TGCGGGCTCG AGGGAGGACT CCAACCGACC AACTTCTATG CCTGCAACTT CATGGGGCAG
CTCGCCTATC ATGATTTCGA GGGTGTGACG GTACGCGAGG AAGAGGGCGA GCGGCTGGTC
AGGAATCTCG GCGACAAGCG CATCCTGATG CTGCGCAATC ACGGCCCCGT CGTGATGGGC
AAATCGCTCA CCGACGCCTT CATCAAATAT TGGGCGCTCC AGCGCGCATG CGAGATCCAG
CTCGCGACGA TGAGCATGGG CAAGCCGATC CTTGTCGACG AAGAGGTCAT CAAGGTCCAC
CAGCGCGACC TTTATATGGC GGCGATCCCC GGCCAGTCGG GCAAGGCCGA GTTCGACGCG
ATGGTACGCA AGGTCGACAA GATCGACACA AGTTGGCGTG ACTAA
 
Protein sequence
MATQLKRNSK YSEAEWTARQ ELAACYRIFA MMRWDELIFN HITVKVPDQD GAFLINPYGM 
HFSEVTASSL IKIDIDGNKL DEDNPWHVNK AGFVQHSLFH RILPDAHAII HTHTTATMAV
CGLEGGLQPT NFYACNFMGQ LAYHDFEGVT VREEEGERLV RNLGDKRILM LRNHGPVVMG
KSLTDAFIKY WALQRACEIQ LATMSMGKPI LVDEEVIKVH QRDLYMAAIP GQSGKAEFDA
MVRKVDKIDT SWRD