Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1037 |
Symbol | |
ID | 4082320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1071275 |
End bp | 1071814 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638009397 |
Product | (2Fe-2S)-binding |
Protein accession | YP_616087 |
Protein GI | 103486526 |
COG category | [C] Energy production and conversion |
COG ID | [COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.365772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGAT TCTCGGTCAA CGACCGTCCG GTCGAATATC GCATGGAGCC CGAAACCCCG CTGCTTTGGG CGCTGCGCGA TGCGTCGAAC CTTACCGGCA CCAAATATGG CTGTGGCACC GGCGATTGCG GTGCCTGCAC CGTCGACATC GACGGCGAGG CGATCCGCAG CTGCCTGGTC ACCATCGCCG AATGCGAAGG CCGCTTCGTC ACGACGATCG AGGGCCTGAC GCGCGACCGT AGCCACCCCG TTCAACAGGC GTGGGTCGCC GAACAGGTGC CGCAATGCGG TTTCTGCCAG TCAGGGATGA TCATGGCCGC CGCCGTGCTG CTCCGCAAGA ACAGCAACCC AAGCGATGCC GAAGTCGATG CCGCGATGAC CAATATCTGC CGCTGTGGCA CCTATCCGCG CATTCGCGCC GCGATCCGCC TCGCAGCGCG GGTCATGCGC GGCGAGGAAC GCATCGCCGC CGCGCCGCCG CCCGGCATCC GGCCCGAAGA CGCCGCGCGC GCGGTACCGG CGCTGCGCCC CGAAAGCTGA
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Protein sequence | MTRFSVNDRP VEYRMEPETP LLWALRDASN LTGTKYGCGT GDCGACTVDI DGEAIRSCLV TIAECEGRFV TTIEGLTRDR SHPVQQAWVA EQVPQCGFCQ SGMIMAAAVL LRKNSNPSDA EVDAAMTNIC RCGTYPRIRA AIRLAARVMR GEERIAAAPP PGIRPEDAAR AVPALRPES
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