| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1017 |
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| Symbol | |
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| ID | 4081705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1049490 |
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| End bp | 1051643 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638009377 |
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| Product | Beta-galactosidase |
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| Protein accession | YP_616067 |
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| Protein GI | 103486506 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3250] Beta-galactosidase/beta-glucuronidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGCT GCCTGACGAT GCTGTTCGCG GCGATGCTTG CCGCCTGTTC GGCGGCGCCG
CGGCCGACGC CCGCCGCGGC GCCGCCTTTC ACGCGCGACA CGACCGAACT GACGCATGGG
TGGCAATTCC GCTTCGACGA TGGGCTGACG CCCGAAACCG CGGCCACGCT CGTCGACGGC
GCGTGGCAAG ATGTCACCGT GCCCCACACA TGGAACCGGC TCGGCGAATA TCGCATCGGC
CGCACGGCGG CGACCGACAA CCGGCAGGGC AAGGGCTGGT ATCGCCTGCG CGTCAATGGC
GCGGCATTGC CAGCGGGCAA GCGCCATATC ATCGAGTTCG AAGCGGTCGG CAATCTCGCC
GACCTATGGG TCAATGGCCG CCATGTCGGG CGCCACGCGG GCGCTTTCTC CCGCTTCCGC
TTCGATCTCA CCGATTTTCT GAACCCAGCG GATCCCAACA TCATCCTGCT GCGCGCCGAC
AACAGTATGC CCGGACCGGG TAGCAGCACC GAGCATATCA TTCCGCTCGA CGGCGACTTC
TTCATCCACG GCGGCCCCTA CCGCCCGGCG CGCCTCCTCC ACGTCGCGCC GAGCCATATC
GCACTCGACG ACCATGGCGG GCCCGGCGTC TATGCGACCC CGACGATCAA AGACGGTGCG
GGTCAGGTGG CGATCCGCGT CCGGTTGACC GACATCGCGG CGGGGCAGAG CCTCGTGGCG
ACGCTGCGCG ATGCCGGGGG GCGAACCGTC GCCGAAGGCA CACGCCCGCT CACCGCGGGT
CAGCGCGAGG CCGCGCTGAC GCTCGACGTC GCCGCGCCGC GCCGCTGGAA CGGTCGCGCC
GACCCTTATC GCTATCGCCT CGAAACGCGC CTTGCCGATA CTGGCGGCAC GCTCGACAGC
GTGACCGTCC CCGTCGGCTT TCGCGCGTTC CGGTTCGACG CGGCAACGGG TTTTTATCTC
AACGGAAAAC ATCTGCCGCT GCATGGCGTA TCGCGACATC AGGATTATCT GGGCAAGGGC
TGGGCACTCT CGGCGGAGGA TCATGCGCGC GACATGGCGC TAATCGCCGA AATGGGCGCG
AACACGGTGC GCTTCGCCCA TTATCAGCAT GCCGCCGACT GGTTCGACCT TGCCGACCGT
TTTGGCATGA TCGTCTGGGC CGAACTGCCC TTCGTCAACA AGCCGAGCCA CGGCGATGCG
CCCGCATCAC CCGAACTGGT CGCCAACGCG CGCCAGCAGA TGATCGAGCT GATTCGCCAG
AATTACAACC ATCCCTCGGT CGTCACCTGG GGCATCGGCA ACGAGGTCGA TATGGACATG
GCGTTCGGCC GTATGGGACC AAAGGCCGAT GCGCGCCCTC TGCTGCGGGA ACTCCATGCG
CTGTCGAAGG CCGAAGACCC ATCACGCCCG ACGGTGATCG CTGACTGCTG CGAACTGACC
CCGGCGAAGA AGCCCGATTA CCAGCCGCCA CTCACCGGCG AGGCCGACCT GATGGGCTAC
AACCGCTATT ATGGCTGGTA TTATGGCGAG GTATCCGACC TCGGCCCGCA TCTCGACGCT
TTGCATGCCA AATATCCGTC CGTGCCGATT TCGGTCAGCG AATATGGCGC GGGCGGCGCG
CTCAGCCAGC ATGTCGAGGA TCCAGCGCAC CACCCGATCA ACCCCGGCGG CCGCCCGCAC
CCGGAGGAGT TCCAGAGCTG GCTGCACGAA CAAAGCTGGC CGCAACTGCG CGATCGCCGC
TATCTATGGG CCAGCTGGAT ATGGAACATG TTCGATTTTT CGTCGAAAAT CCGAAAGGAA
GGCGACGCGA CCGACATCAA CGACAAGGGC CTCGTCACCT TCGACCGCAA GGTCAAGAAG
GACGCCTTTT TCTATTACAA GGCCCAATGG TCGACCGAAC CCGTCGTCCA TATCACCAGC
CGTCGCTGGA CGACGCGCGC CAGTCCCGTC ACGGCGATCA AGGTTTACAG TAACGCGCCC
GCCGTGACGC TGACGTTCAA CGGGGTGCCG CTGGGCGAGG TCGCGTGCGC CGATCGCATC
TGCACGCTGG ACAATATCGT GCTGCGCCCC GGCGACAATG TGGTGACGGC GCGCGCGACC
TTTGCATCCG GGGTGGTGAA GGACGAAGTG CGCTGGACCC TTACGCCGCT CTAA
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| Protein sequence | MPRCLTMLFA AMLAACSAAP RPTPAAAPPF TRDTTELTHG WQFRFDDGLT PETAATLVDG
AWQDVTVPHT WNRLGEYRIG RTAATDNRQG KGWYRLRVNG AALPAGKRHI IEFEAVGNLA
DLWVNGRHVG RHAGAFSRFR FDLTDFLNPA DPNIILLRAD NSMPGPGSST EHIIPLDGDF
FIHGGPYRPA RLLHVAPSHI ALDDHGGPGV YATPTIKDGA GQVAIRVRLT DIAAGQSLVA
TLRDAGGRTV AEGTRPLTAG QREAALTLDV AAPRRWNGRA DPYRYRLETR LADTGGTLDS
VTVPVGFRAF RFDAATGFYL NGKHLPLHGV SRHQDYLGKG WALSAEDHAR DMALIAEMGA
NTVRFAHYQH AADWFDLADR FGMIVWAELP FVNKPSHGDA PASPELVANA RQQMIELIRQ
NYNHPSVVTW GIGNEVDMDM AFGRMGPKAD ARPLLRELHA LSKAEDPSRP TVIADCCELT
PAKKPDYQPP LTGEADLMGY NRYYGWYYGE VSDLGPHLDA LHAKYPSVPI SVSEYGAGGA
LSQHVEDPAH HPINPGGRPH PEEFQSWLHE QSWPQLRDRR YLWASWIWNM FDFSSKIRKE
GDATDINDKG LVTFDRKVKK DAFFYYKAQW STEPVVHITS RRWTTRASPV TAIKVYSNAP
AVTLTFNGVP LGEVACADRI CTLDNIVLRP GDNVVTARAT FASGVVKDEV RWTLTPL
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