| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1014 |
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| Symbol | |
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| ID | 4081702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1042291 |
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| End bp | 1044609 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638009374 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_616064 |
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| Protein GI | 103486503 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.285084 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCCGA TTTCGCGCAA TCTGACAAGC GCCACGCTCG CCACGCTGCT GGTGGCCGGC
TCGCTGGCCC CCGCCCCGCT GACCGCCGCC CCCGCGGCGA CCGCCAGCGA CAAGGCGCCG
GTCGATGCCG CGAGCTGGCA GCGCGCCGAC CCCGCGATGG ACCGCTTCAT CGCCGATCTG
ATGGTGAAGA TGACGCTCGA CGAAAAGACC GGCCAGCTCA CGCTGCTCAC GAGCAACTGG
GAGTCGACCG GCCCGACGAT GCGCGACAGT TACAAGGAGG ATATTCGCGC CGGGCGTGTC
GGGGCGATCT TCAACGCCTA CACCGCCAAA TATACGCGCG AACTGCAAGC GCTTGCGGTC
GAGGGAACGC GCCTCAAAAT CCCCCTGCTC TTCGGCTATG ACGTGATCCA CGGCCACCGG
ACGATCTTTC CCATCTCGCT CGGCGAAGCG GCGAGCTGGG ACCTGCAGGC GATTGAAAAA
GCCGCTCGAA TCTCGGCCAT CGAGGCATCG GCCGAGGGCA TCCACTGGAC CTTCTCACCC
ATGGTCGACA TCGCGCGCGA TCCGCGCTGG GGTCGCATTT CCGAAGGCGC GGGCGAGGAT
GTCTATCTCG GCAGCCTGAT CGCAAAGGCG CGCGTGCGCG GCTATCAGGG CGGCGACCTG
TCGCGGCCCG ACACGATCCT GGCGACCGCC AAGCATTTTG CCGCCTATGG CGCGGCGCAG
GCGGGACGCG ATTACCACAC GGTCGACATT TCGGAGCGCA CGATGCGCGA TGTCTATCTG
CCGCCATTCA AGGCCGCGGC CGACGCGGGG GCAGCGACCT TCATGACCGC ATTCAACGAA
TATGACGGTG TCCCGGCGTC GGGGAGCCAC TATCTGCTCA CCGACGTGCT GCGCAAGAAA
TGGGGCTTCA AAGGCTTTGT CGTAACCGAT TACACGTCGA TCAACGAAAT GGTCCCGCAC
GGCTATGCGA AGGATCTGAA GCAGGCAGGC GAGCAGGCGA TGCGCGCCGG AGTCGACATG
GACATGCAAG GTGCGGTTTT CATGGAAAAC CTCGCCAAAT CGGTCGCCGA GGGCAAGGTC
GACACCGCGC GCATCGACGC GGCGGTGAAG GCGATACTCG AGATGAAATA TCGCCTCGGC
CTGTTCGACG ATCCTTATCG TTACGCCGAC GCGGCGCGCG AAAAAGCGAC GATCTACAAG
CCCGCGTTTC TCGAAGCGGC GCGCGATGTC GCGCGCAAGT CGATCGTCCT CCTCAAGAAC
AAGGACAATG TCCTGCCACT GGCCGCCAGC GCAAAGTCGA TCGCGGTGAT CGGCCCGCTC
GGCAACAGCA AGGAAGATAT GATCGGCAGC TGGTCGGCCG CGGGCGACCG GCGGACGCGG
CCGGTTACCT TGCTCGAAGG CTTGCAGGCC GGCGCCCCCA AGGGAACGAC GATCGCCTAT
GCCAAGGGCG CGAGCTATCA TTTCGACGAT GTCGGCAAGA CCGACGGTTT TGCCGAAGCG
CTCGCGCTTG CGGAAAAATC GGATGTCATC ATCGCCGCGA TGGGTGAACA TTGGAACATG
ACCGGCGAGG CGGCAAGCCG CACCTCGCTT GACCTGCCGG GCAACCAGCA GGCGCTTCTC
GAAGCGCTCG AAAAGACCGG CAAGCCGGTC ATCCTCGTGC TGATGAGCGG GCGACCGAAC
AGCATCGAAT GGGCCGATGC CAATGTCGAT GCGATTCTGG AGGCCTGGTA TCCCGGCACG
ATGGGGGGAC ATGCGATCGC CGACATATTG TACGGTCGCT ACAACCCGTC GGGCAAATTA
CCGGTGACCT TTCCGCGCAC GGTCGGGCAG GTGCCGATCC ATTATGACAT GAAGAACACC
GGTCGCCCGA TCGAACTGGG CGCGCCGGGC GCGAAATATG TCTCGCGCTA CCTCAACACG
CCGAACACGC CGCTTTATCC CTTTGGCTAT GGCCTCAGCT ACACAAGCTT CACTTACTCG
CCGGTCACGC TCGACAGGTC GAAAATCCGC CCCGGCGAAC CGCTGACCGC CAGCGTCACC
GTGACCAACA GCGGCCCGCG CGACGGGGAG GAGGTGGTGC AGCTTTACGT CCGCGACCTC
GTCGGTTCGG TGACGCGCCC GGTCAAGGAA TTGAAGGGAT TCCAGAAGAT CGGCCTGAAA
AAGGGCGAAA CGCGCACGGT GCGCTTCACG CTGACCGACG CCGACCTCGC CTTCACGCGC
CAGGACATGA GCTGGGGCAG CGAGCCCGGC GCGTTCAAGC TGTGGATCGG CCCCTCGTCG
GCCGAAGGAT CCGAAGCCAG CTTCGAACTG ACCGAATAG
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| Protein sequence | MPPISRNLTS ATLATLLVAG SLAPAPLTAA PAATASDKAP VDAASWQRAD PAMDRFIADL
MVKMTLDEKT GQLTLLTSNW ESTGPTMRDS YKEDIRAGRV GAIFNAYTAK YTRELQALAV
EGTRLKIPLL FGYDVIHGHR TIFPISLGEA ASWDLQAIEK AARISAIEAS AEGIHWTFSP
MVDIARDPRW GRISEGAGED VYLGSLIAKA RVRGYQGGDL SRPDTILATA KHFAAYGAAQ
AGRDYHTVDI SERTMRDVYL PPFKAAADAG AATFMTAFNE YDGVPASGSH YLLTDVLRKK
WGFKGFVVTD YTSINEMVPH GYAKDLKQAG EQAMRAGVDM DMQGAVFMEN LAKSVAEGKV
DTARIDAAVK AILEMKYRLG LFDDPYRYAD AAREKATIYK PAFLEAARDV ARKSIVLLKN
KDNVLPLAAS AKSIAVIGPL GNSKEDMIGS WSAAGDRRTR PVTLLEGLQA GAPKGTTIAY
AKGASYHFDD VGKTDGFAEA LALAEKSDVI IAAMGEHWNM TGEAASRTSL DLPGNQQALL
EALEKTGKPV ILVLMSGRPN SIEWADANVD AILEAWYPGT MGGHAIADIL YGRYNPSGKL
PVTFPRTVGQ VPIHYDMKNT GRPIELGAPG AKYVSRYLNT PNTPLYPFGY GLSYTSFTYS
PVTLDRSKIR PGEPLTASVT VTNSGPRDGE EVVQLYVRDL VGSVTRPVKE LKGFQKIGLK
KGETRTVRFT LTDADLAFTR QDMSWGSEPG AFKLWIGPSS AEGSEASFEL TE
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