| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1009 |
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| Symbol | |
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| ID | 4081697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1035062 |
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| End bp | 1036030 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638009369 |
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| Product | 2-nitropropane dioxygenase, NPD |
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| Protein accession | YP_616059 |
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| Protein GI | 103486498 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0145126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.697248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGAAAT ACGGCCTTCC ACCCGCCTTG ACGCGCAATT TGCGCCTGCC GGCGATCGCC
GCGCCGATGT TCCTCGTCTC GGGACCGGAG ATGGTGATCG CGGCGTCGCG CGCCGGGGTG
ATCGGCAGCT TCCCTGCCCC CAATGCGCGC ACGTCGGCTG ACCTTGAAGA TTGGGTGCGC
CGGATCGACG CGGCGCTGTC GAACGATCCC GACGCCGCCC CCTGGGCAGT TAACCTCGTC
GTCCATCCGT CGAACAGCCG CCTTCCCGAA GACCTGGCCT GCGTCGTGCG CCACAAGGTA
CCGCTGGTGA TCACCGCGCT TGGCAGTCCG ACGCGCGTAG TCGAGGAAAT CCACAGCTAT
GGCGGACTGG TGTTCGCCGA CGTCAATTCG GTCGGCTTTG CGCGCAAGGC GGCGGCAGCC
GGGGTCGACG GCCTGGTGCT CGTCGCGGCG GGTGCGGGCG GGCATACCGG AGCGACGGCG
GGTTTCGCCT TTGTCGAGGA GGTGCGGCAA TTCTGGGACG GCCCGCTGGT GCTCGGCGGC
GCGATTTCAA CGGGCCACGC GGTGCGCGCG GCGGAGATCC TGGGTGCCGA CCTCGCCTAT
CTTGGCACGT CGCTGATCGC CTGCACCGAA AGCATGGCGG CGCCGGACTA CAAGGATATG
GTCGTCGCCG CCGGCGCCGA GGACATTGTG CCGTCGAAGG GCATCACCGG TGTGACCGCC
AACTGGCTGA AATCGAGCCT GATCGCGGCT GGATATGACC CCGCCAACAT GCCCGAGGAC
AAGCGCCCGA ACTTCTCCGA CGCGCAGGAT GACGCCAAGG CGTGGAAGAA TGTCTGGTCC
GCCGGACAAG GCGTCGGCGC GGTCCGCGGC GTCGAACCCG TCGCGGCGAT CGTCGACCGC
CTCCTGTCCG AATATGATGC CGCTGCCGCC CGGCCGCGCT TTGCCCCCGC CGAAGGAGCC
CTTGCATGA
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| Protein sequence | MSKYGLPPAL TRNLRLPAIA APMFLVSGPE MVIAASRAGV IGSFPAPNAR TSADLEDWVR
RIDAALSNDP DAAPWAVNLV VHPSNSRLPE DLACVVRHKV PLVITALGSP TRVVEEIHSY
GGLVFADVNS VGFARKAAAA GVDGLVLVAA GAGGHTGATA GFAFVEEVRQ FWDGPLVLGG
AISTGHAVRA AEILGADLAY LGTSLIACTE SMAAPDYKDM VVAAGAEDIV PSKGITGVTA
NWLKSSLIAA GYDPANMPED KRPNFSDAQD DAKAWKNVWS AGQGVGAVRG VEPVAAIVDR
LLSEYDAAAA RPRFAPAEGA LA
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