| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1000 |
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| Symbol | |
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| ID | 4081688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1023510 |
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| End bp | 1024097 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638009360 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_616050 |
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| Protein GI | 103486489 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4566] Response regulator |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.745862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGTTAA AGGCGATGAT CGCGACCAGC CCGATCGCGG CGGTAATCAG CAATCCCCAT
CTTCCCGACA ATCCCATCGT CGAATGCAAC GATGCCTTTG CCGCGCTGAC CGGATACCGG
CCCGACGAAA TCATCGGCCG CAACTGCCGC TTTCTGACCG GCCCCGATAC CGAGCCCGAA
CTCAGTGCCG AACTGCGCCG CGCGATCCGC GACCGCCGCG CGGCGCTGGT CGAGATACTG
AACTACAAGA AGGACGGCAC GCGCTTCCGC AACGCGGTGC TGGTTGCGCC GCTGTTCGGA
CCCGACGGCG AGCTTGAGTA TTTTCTGGGC TCGCAGATGG AGGTCGAGCG CGGCGATGCG
CGCGCCGACG ATCGGCGCGA TGCGGCACGC GCGCGCATCG CCGCGCTGTC GCCGCGTCAG
CGCGAGGTGC TGCTGCTGAT GGCCGAAGGG CTGCTCAACA AGCAGATCGC GTGGAGGCTG
GGCCTCTCTG AACGCACGAT CAAGATGCAC CGTTCGGCGC TGCTCCGCTC GCTCGGGGTC
GAAACGACCG CCGATGCGAT CCGGCTCGCG GTCGAGGCGG GATACTGA
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| Protein sequence | MTLKAMIATS PIAAVISNPH LPDNPIVECN DAFAALTGYR PDEIIGRNCR FLTGPDTEPE
LSAELRRAIR DRRAALVEIL NYKKDGTRFR NAVLVAPLFG PDGELEYFLG SQMEVERGDA
RADDRRDAAR ARIAALSPRQ REVLLLMAEG LLNKQIAWRL GLSERTIKMH RSALLRSLGV
ETTADAIRLA VEAGY
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