Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0981 |
Symbol | |
ID | 4079980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1007051 |
End bp | 1007464 |
Gene Length | 414 bp |
Protein Length | 137 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638009341 |
Product | excinuclease ABC subunit C |
Protein accession | YP_616031 |
Protein GI | 103486470 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2827] Predicted endonuclease containing a URI domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.16466 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGTTCT GGACCTATAT CCTCCTCTGT GCCGATGGGC TCTATTACAC CGGGCATACC GACAATCTTG AGTTCAGGAT CGCCCAGCAT CAAAGCGGAT TGATCGAAGG CTTCACCTCG TCGCGCTTGC CCGTCCGCCT TATGTGGTCG CAAGACTTCG CCACGCGCTA TGAAGCACTG GATGCCGAAG CGCGGATCAA AAAATGGTCG CGGGCGAAGA AGGAAGCGTT GATCCGTGGG GATTGGGAAG CCGTGAGCCA TTTCGCCAAA CCACCCAAGG AGCGCCCCAC CTCTCCGTTC GCATCGAGCG AAGTCGAGAT GCCCGTCGAA ATAGCGCCCA GCCCGATTGG TGTCTCGACT TCGCTCGACA CGAGCGGGAA TAGAGGCTTG CCCAGTGGCG GAGGCAACCC ATGA
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Protein sequence | MAFWTYILLC ADGLYYTGHT DNLEFRIAQH QSGLIEGFTS SRLPVRLMWS QDFATRYEAL DAEARIKKWS RAKKEALIRG DWEAVSHFAK PPKERPTSPF ASSEVEMPVE IAPSPIGVST SLDTSGNRGL PSGGGNP
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