| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0980 |
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| Symbol | |
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| ID | 4079979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1005177 |
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| End bp | 1007054 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638009340 |
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| Product | DNA primase |
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| Protein accession | YP_616030 |
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| Protein GI | 103486469 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.416677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTCA CCCCGCAATG GCTTGACGAA CTGCGCTCGC GGATCACGCT GTCGACCCTC
ATCGGGCGCA CTGTGAAGAT CACGCGCGCG GGCCGCGAGT ATAAGGCCTG CTGCCCCTTC
CATAACGAAA AGACGCCCAG CTTCACGATC AACGATGAAA AGGGCTTCTA TCACTGCTTC
GGCTGCGGCG CGCATGGCGA TGCGATCCGC TGGATGACCG ACCAGCGCGG CCTCAGCTTC
ATGGATGCGG TGAAGGAGCT TGCCGCCGAA GCGGGGATGG AGGTTCCCGC CCCCGACCCG
CGTGCCGCGA AAAAGGCCGA AGAACAGGCA AGTCTGCGCG ACGTGATGCA GGCCGCGGCC
GAATGGTTCG CGCAGCAGCT TGGCAGCAGC AACGGCGCCC CGGCGCGCGA ATATCTCGCC
AAGCGGGGTA TTTCGGAAGC GACGCGCAAG GCCTTCGGCT TCGGCCTTGC GCCCGACAGC
CGCAGTGCGC TGAAGGAGGC GCTCAAGACG TTCCCGACCG CGATGCTCGT CGAGGCGGGG
ATGCTGATCG CCGTCGATGA CAAGGAGCCC TACGACCGTT TCCGTGGGCG GCTGATGATC
CCGATCCGTG ATGCGCGCGG GCGCGTCATC GCCTTTGGCG GACGCATCCT TGGCGACGGC
GAGCCCAAAT ATCTGAACTC GCCCGACACG CCGCTCTTCG ACAAGGGGCG CACGCTCTAC
AATCTCGACA AGGCAAGCCC CGCATCGCGG CGGACGAACC GCATCGTCGT CGTCGAAGGC
TATATGGACG TCATCGCGCT GGCGGAAGCG GGGATCACCG ACGCGGTCGC GCCGCTCGGC
ACCGCGCTCA CCGAGAACCA GCTCGCGATG CTGTGGCGCA TGGTGCCCGT GCCCATCCTC
TGTTTCGACG GCGACAGCGC GGGGCAGAAA GCGGCAATGC GCGCCGCGAT GCGCGCGCTG
CCGCTGCTCC GCCCCGGCTT CAGCCTCGCC TTTGCGACGC TGCCGGCTGG GCAGGACCCC
GACGACCTGG TGCGCGCCAA GGGCGCCGAG GGCTTCGCGG CGATCCTGGA GGATGCGCAG
CCGCTCGTCG AGCGCCTGTG GGCGCATGAG GTCGCCGCGG GGCCGCTCGC GACGCCCGAG
GAGCGGGCGG CGCTCAAGAC GCGGCTGTTG GCGCACGCAG ACGTGATCGA GGATGCCGAT
GTGCGCCACC ATTATCGCGA GGCGTTCCGC GAAAAACTCG ACGCGCTGTT CGCAAGGGCG
CCCGCCGGGC GCGGCCCGCG CGTGCCATGG GCGCCGCAGC CGGGGCGCGG CGGTCGGCGC
TTCGCGCCCG ACCCGCGGCT CCAGCCGCCG GGCGAGGAGA CACGCGCGCT CGGCCAGACG
GGCATCGCGG GCCCGCTCGC CGCGGCGTTG CTCGGCGGCC TGCTCCGCTA TCCGCAAGCG
ATCCGGCGCA ACGAAGAGGC GCTGTGCCGC CTCGCCATCC CCGATTCTGG CGACGCCGAA
CTGCTCGGGC TGATGCTTGA CATCGCAAAT GCCCGCGAAG GGCTTGATTG CGAGGGGTTG
CTTGCCATAT TGGAACCCAT GAAAGTGTAT AATAGGGCGA TGACATTGCT CAGAGCCGAT
GGAATGCACT TCTCGTTCAA TCGACGGCTC GAAGGCGAAG AGGTTGATAA GGCGCGCGAG
ATCGCGCTGC GCGACCTTGA CGAATATATC GGCGTGCTCG TGACGCAGCC CGAAATCCGT
GCCCGGCTGG CCGAGGCGAC CGCGGATTAT ATGCGCACGA TGGACGACGA AGGCCATGCG
CGGCAGCAAA AGCTGCGCGC GATGGACGAG GATCTGACCC GCCGCCTGGC CGCGCTGTCC
GACAGCCGCA GCCAGTAA
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| Protein sequence | MTLTPQWLDE LRSRITLSTL IGRTVKITRA GREYKACCPF HNEKTPSFTI NDEKGFYHCF
GCGAHGDAIR WMTDQRGLSF MDAVKELAAE AGMEVPAPDP RAAKKAEEQA SLRDVMQAAA
EWFAQQLGSS NGAPAREYLA KRGISEATRK AFGFGLAPDS RSALKEALKT FPTAMLVEAG
MLIAVDDKEP YDRFRGRLMI PIRDARGRVI AFGGRILGDG EPKYLNSPDT PLFDKGRTLY
NLDKASPASR RTNRIVVVEG YMDVIALAEA GITDAVAPLG TALTENQLAM LWRMVPVPIL
CFDGDSAGQK AAMRAAMRAL PLLRPGFSLA FATLPAGQDP DDLVRAKGAE GFAAILEDAQ
PLVERLWAHE VAAGPLATPE ERAALKTRLL AHADVIEDAD VRHHYREAFR EKLDALFARA
PAGRGPRVPW APQPGRGGRR FAPDPRLQPP GEETRALGQT GIAGPLAAAL LGGLLRYPQA
IRRNEEALCR LAIPDSGDAE LLGLMLDIAN AREGLDCEGL LAILEPMKVY NRAMTLLRAD
GMHFSFNRRL EGEEVDKARE IALRDLDEYI GVLVTQPEIR ARLAEATADY MRTMDDEGHA
RQQKLRAMDE DLTRRLAALS DSRSQ
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