Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0976 |
Symbol | |
ID | 4079975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1000692 |
End bp | 1001333 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638009336 |
Product | YceI |
Protein accession | YP_616026 |
Protein GI | 103486465 |
COG category | [S] Function unknown |
COG ID | [COG2353] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCGCA TCGCCCCCTT TGCCGCTCTT GCCCTCACCG CCGCCGCCGC GACGATCGTC GTCGCGCAGG ATTCGGGCGT CCCCGGCGCC CCCGACAAAT CGCGCGTTGC CGCGGGCACC TATGTCGCCG ATCCGCTTCA CACGATGGTC GTCTGGGAAG TCGATCATTT CGGCTTCAGC AAATATACGG GCATATTCGG CGACGTGACC GGGACGCTGG TGATCGATCC CGCCAATCCT GCCGCGGCCA GGGTCGAGGT GACGATCCCC GTCGCGAAGG TGACGACCGC CAGCGCCGGG CTGACCAGCC ACCTGCTGCG CGCGGGCAAG GATGGCGGCA AGCCCGACTT CTTCGGCGCT GCCCCCGCCG ACGCCAGGTT CGTCTCAACC AGCGTTGTCG TCGATCCCGA AGGCGACGAA GCCACGGTGA CCGGCAACCT GACCCTTAAC GGCGTGACCA GGCCCGTCAC GCTCGACGTC GATTTCCACG GCGCGGGCAC CAATCCGTTC AACAAGAAGG CGACCATCGG GTTCGAGGCC GAAGGCACGA TCCGCCGCAG CGATTTCGGC ATCGCCTATG GCATCCCGGT GGTCAGCGAC GAGGTCGAAC TGGAAATCCA CGCCGCTTTC GAAAAACAAT AA
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Protein sequence | MRRIAPFAAL ALTAAAATIV VAQDSGVPGA PDKSRVAAGT YVADPLHTMV VWEVDHFGFS KYTGIFGDVT GTLVIDPANP AAARVEVTIP VAKVTTASAG LTSHLLRAGK DGGKPDFFGA APADARFVST SVVVDPEGDE ATVTGNLTLN GVTRPVTLDV DFHGAGTNPF NKKATIGFEA EGTIRRSDFG IAYGIPVVSD EVELEIHAAF EKQ
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