Gene Sala_0976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0976 
Symbol 
ID4079975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1000692 
End bp1001333 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content66% 
IMG OID638009336 
ProductYceI 
Protein accessionYP_616026 
Protein GI103486465 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGCA TCGCCCCCTT TGCCGCTCTT GCCCTCACCG CCGCCGCCGC GACGATCGTC 
GTCGCGCAGG ATTCGGGCGT CCCCGGCGCC CCCGACAAAT CGCGCGTTGC CGCGGGCACC
TATGTCGCCG ATCCGCTTCA CACGATGGTC GTCTGGGAAG TCGATCATTT CGGCTTCAGC
AAATATACGG GCATATTCGG CGACGTGACC GGGACGCTGG TGATCGATCC CGCCAATCCT
GCCGCGGCCA GGGTCGAGGT GACGATCCCC GTCGCGAAGG TGACGACCGC CAGCGCCGGG
CTGACCAGCC ACCTGCTGCG CGCGGGCAAG GATGGCGGCA AGCCCGACTT CTTCGGCGCT
GCCCCCGCCG ACGCCAGGTT CGTCTCAACC AGCGTTGTCG TCGATCCCGA AGGCGACGAA
GCCACGGTGA CCGGCAACCT GACCCTTAAC GGCGTGACCA GGCCCGTCAC GCTCGACGTC
GATTTCCACG GCGCGGGCAC CAATCCGTTC AACAAGAAGG CGACCATCGG GTTCGAGGCC
GAAGGCACGA TCCGCCGCAG CGATTTCGGC ATCGCCTATG GCATCCCGGT GGTCAGCGAC
GAGGTCGAAC TGGAAATCCA CGCCGCTTTC GAAAAACAAT AA
 
Protein sequence
MRRIAPFAAL ALTAAAATIV VAQDSGVPGA PDKSRVAAGT YVADPLHTMV VWEVDHFGFS 
KYTGIFGDVT GTLVIDPANP AAARVEVTIP VAKVTTASAG LTSHLLRAGK DGGKPDFFGA
APADARFVST SVVVDPEGDE ATVTGNLTLN GVTRPVTLDV DFHGAGTNPF NKKATIGFEA
EGTIRRSDFG IAYGIPVVSD EVELEIHAAF EKQ