Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0968 |
Symbol | |
ID | 4079968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 993781 |
End bp | 994434 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638009329 |
Product | hypothetical protein |
Protein accession | YP_616019 |
Protein GI | 103486458 |
COG category | [S] Function unknown |
COG ID | [COG3832] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTTCG ATACCGCCGC CCATGCCGCC ATGGTTGTCC GCAAGGTCGA GGACGTGACG CACGCGGGCC AGCCCTGCCG CGCCGTCGTC GCCGCGCGCG CCTATGCCAC CGACATCGAC GATCTGTGGA ATGCGATCAC CGACAAGGCG CGCATCGCGC GCTGGTTCGC CCCCGTGGAG GGCGACCTTG AACTTGGCGG CAAATATCAG ATCAAAGGCA ATGCCGGCGG CACCGTCACC GCGTGCGAGC CGCCGAAGGG CTTTGCCCTC ACCTGGGAGT TTGGCGGCGG TGTGAGCTGG GTCGAGGTCG AGCTGACGGA GGCCGGCGAC CAGACACAAT TGACCCTGAA ACATATCGCG CCGCGTGACG GCAAGTCGGA AGAGTTCTGG GACCAGTTCG GCCCCGGCGC GGTCGGCGTC GGCTGGGACC TGTCGCTGCT CGGCCTCGCC TGGCACCTCG AAACCGGCGA TTCGGTTCAG GAACAATTTG CCGAAACGAC ATGGCCGTCG AGCGCCGAGG GGCGGGCTTT CGTGGGGGCG AGCAGCGATG GCTGGGCCGC AGCATCAATT GCTTATGGGA CCGATGAGTC AGCCGCACGC CGCGCCGCGA CCGCCACGAC CGCCTTCTTT ACCGGCGTAT CTGCATCTGA GTGA
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Protein sequence | MPFDTAAHAA MVVRKVEDVT HAGQPCRAVV AARAYATDID DLWNAITDKA RIARWFAPVE GDLELGGKYQ IKGNAGGTVT ACEPPKGFAL TWEFGGGVSW VEVELTEAGD QTQLTLKHIA PRDGKSEEFW DQFGPGAVGV GWDLSLLGLA WHLETGDSVQ EQFAETTWPS SAEGRAFVGA SSDGWAAASI AYGTDESAAR RAATATTAFF TGVSASE
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