Gene Sala_0968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0968 
Symbol 
ID4079968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp993781 
End bp994434 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content67% 
IMG OID638009329 
Producthypothetical protein 
Protein accessionYP_616019 
Protein GI103486458 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTCG ATACCGCCGC CCATGCCGCC ATGGTTGTCC GCAAGGTCGA GGACGTGACG 
CACGCGGGCC AGCCCTGCCG CGCCGTCGTC GCCGCGCGCG CCTATGCCAC CGACATCGAC
GATCTGTGGA ATGCGATCAC CGACAAGGCG CGCATCGCGC GCTGGTTCGC CCCCGTGGAG
GGCGACCTTG AACTTGGCGG CAAATATCAG ATCAAAGGCA ATGCCGGCGG CACCGTCACC
GCGTGCGAGC CGCCGAAGGG CTTTGCCCTC ACCTGGGAGT TTGGCGGCGG TGTGAGCTGG
GTCGAGGTCG AGCTGACGGA GGCCGGCGAC CAGACACAAT TGACCCTGAA ACATATCGCG
CCGCGTGACG GCAAGTCGGA AGAGTTCTGG GACCAGTTCG GCCCCGGCGC GGTCGGCGTC
GGCTGGGACC TGTCGCTGCT CGGCCTCGCC TGGCACCTCG AAACCGGCGA TTCGGTTCAG
GAACAATTTG CCGAAACGAC ATGGCCGTCG AGCGCCGAGG GGCGGGCTTT CGTGGGGGCG
AGCAGCGATG GCTGGGCCGC AGCATCAATT GCTTATGGGA CCGATGAGTC AGCCGCACGC
CGCGCCGCGA CCGCCACGAC CGCCTTCTTT ACCGGCGTAT CTGCATCTGA GTGA
 
Protein sequence
MPFDTAAHAA MVVRKVEDVT HAGQPCRAVV AARAYATDID DLWNAITDKA RIARWFAPVE 
GDLELGGKYQ IKGNAGGTVT ACEPPKGFAL TWEFGGGVSW VEVELTEAGD QTQLTLKHIA
PRDGKSEEFW DQFGPGAVGV GWDLSLLGLA WHLETGDSVQ EQFAETTWPS SAEGRAFVGA
SSDGWAAASI AYGTDESAAR RAATATTAFF TGVSASE