Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0956 |
Symbol | |
ID | 4082455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 981825 |
End bp | 983090 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638009317 |
Product | hypothetical protein |
Protein accession | YP_616007 |
Protein GI | 103486446 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCCGCAC CCGCCGCCGC GCAAGATGTC GCGATCACCA ATGCCAGGCT CGTCATCGGC GACGGCAGCG CGCCGATCGA GGGCGGCACC GTCGTCGTGC GCGGCGGCAG GGTCGTCGCC GCCGGTGCGG GCGTCGCGGT GCCCGCGGGC GTCGAGCGCG TCGATGCCGA AGGCCGCTAT GTGACGCCGG GCATCGTCGC GGCGTTCAGC CGGGTCGGGC TGGTCGAGGT CGACGCGGTG AGCGGATCGA ACGACCGCGC GGCGCCGCGC ACGCGCTTTT CGGCGGGGCT TGATATTGCG CCAGCATTGA ACCCGATGGG ATCGCCCGTC GCGGTCAATC GCGCGTCGGG CGTCACGCGC GCGATCGTCG CGCCCGGCGG CAGCAGCAAT TTGTTCGCGG GCCAGGGCGC GGTCGTCGAC CTGGCCGACG ATATGGACAT GGTGACGCGC CCGCGCGCGC TGCAATATGT GGCGTTCGGC GAGGATGGGG CCGCGAAGGC GGGGGGCAGC CGCGCCGCGA CCTTCCTCTT GTTCCGTGAA CAATTGCTTG CGGCGCGCAG CTATGCCCGC AATCCCGCGG CGCTCGCCGA ATGGGGCAAT GACGCGATGC TCCAGCGCGC CGATGCCGAG GCGCTGGTGC GCGTGATCGA CGGCACGACG CCGCTGTTCG TGCGGGTCGA CCGTGCCGCC GACATCGTCA ATGTGCTGAA GCTGAAAGGC GAGTTTCCGG CGATGAAGCT GGTGCTCGTC GGCGTCACCG ACGGCTGGCT CGTCGCGCGC GAGATCGCCG CGGCGAAGGT GCCGGTGCTC GTCTCGCCGC TGAGCGACCT GCCCGACAGT TTCGAGCGGC TGGCGGCGAC GCAATCGAAC GCCGGACGGC TGAAGGCCGC GGGCGTCGAT GTGTCAGTGG GCGTGTTCGA CGACGATGAT GCACACAAGA TGGGCTATGC CACGCAATAT GCGGGCAATC TGGTCGGGCT GGCGCGGATG CCTGGTGCGA GCGGGATGAC GTGGGATCAG GCCTTTGCCG CGATCAGCAG CGCGCCCGCG CGCGCGGTAG GCATGGAAGG CAGCATCGGA TCGCTGCGCC CCGGCCGCGT CGGCGACGTC GTGATCTGGG ACAACGACCC GCTCGAACTC GGCAGCCGAC CGGTCGCGAT CTGGATCGAC GGCAGGGCGC AGTCGCTGAC GACCCGGCAG GACCGCCTGC GCGATCGCTA TGCGACGCCG CAGGAAGGCG CGTTGCCGAA GGCCTATGAT CGGTAG
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Protein sequence | MAAPAAAQDV AITNARLVIG DGSAPIEGGT VVVRGGRVVA AGAGVAVPAG VERVDAEGRY VTPGIVAAFS RVGLVEVDAV SGSNDRAAPR TRFSAGLDIA PALNPMGSPV AVNRASGVTR AIVAPGGSSN LFAGQGAVVD LADDMDMVTR PRALQYVAFG EDGAAKAGGS RAATFLLFRE QLLAARSYAR NPAALAEWGN DAMLQRADAE ALVRVIDGTT PLFVRVDRAA DIVNVLKLKG EFPAMKLVLV GVTDGWLVAR EIAAAKVPVL VSPLSDLPDS FERLAATQSN AGRLKAAGVD VSVGVFDDDD AHKMGYATQY AGNLVGLARM PGASGMTWDQ AFAAISSAPA RAVGMEGSIG SLRPGRVGDV VIWDNDPLEL GSRPVAIWID GRAQSLTTRQ DRLRDRYATP QEGALPKAYD R
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