Gene Sala_0956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0956 
Symbol 
ID4082455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp981825 
End bp983090 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content70% 
IMG OID638009317 
Producthypothetical protein 
Protein accessionYP_616007 
Protein GI103486446 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCGCAC CCGCCGCCGC GCAAGATGTC GCGATCACCA ATGCCAGGCT CGTCATCGGC 
GACGGCAGCG CGCCGATCGA GGGCGGCACC GTCGTCGTGC GCGGCGGCAG GGTCGTCGCC
GCCGGTGCGG GCGTCGCGGT GCCCGCGGGC GTCGAGCGCG TCGATGCCGA AGGCCGCTAT
GTGACGCCGG GCATCGTCGC GGCGTTCAGC CGGGTCGGGC TGGTCGAGGT CGACGCGGTG
AGCGGATCGA ACGACCGCGC GGCGCCGCGC ACGCGCTTTT CGGCGGGGCT TGATATTGCG
CCAGCATTGA ACCCGATGGG ATCGCCCGTC GCGGTCAATC GCGCGTCGGG CGTCACGCGC
GCGATCGTCG CGCCCGGCGG CAGCAGCAAT TTGTTCGCGG GCCAGGGCGC GGTCGTCGAC
CTGGCCGACG ATATGGACAT GGTGACGCGC CCGCGCGCGC TGCAATATGT GGCGTTCGGC
GAGGATGGGG CCGCGAAGGC GGGGGGCAGC CGCGCCGCGA CCTTCCTCTT GTTCCGTGAA
CAATTGCTTG CGGCGCGCAG CTATGCCCGC AATCCCGCGG CGCTCGCCGA ATGGGGCAAT
GACGCGATGC TCCAGCGCGC CGATGCCGAG GCGCTGGTGC GCGTGATCGA CGGCACGACG
CCGCTGTTCG TGCGGGTCGA CCGTGCCGCC GACATCGTCA ATGTGCTGAA GCTGAAAGGC
GAGTTTCCGG CGATGAAGCT GGTGCTCGTC GGCGTCACCG ACGGCTGGCT CGTCGCGCGC
GAGATCGCCG CGGCGAAGGT GCCGGTGCTC GTCTCGCCGC TGAGCGACCT GCCCGACAGT
TTCGAGCGGC TGGCGGCGAC GCAATCGAAC GCCGGACGGC TGAAGGCCGC GGGCGTCGAT
GTGTCAGTGG GCGTGTTCGA CGACGATGAT GCACACAAGA TGGGCTATGC CACGCAATAT
GCGGGCAATC TGGTCGGGCT GGCGCGGATG CCTGGTGCGA GCGGGATGAC GTGGGATCAG
GCCTTTGCCG CGATCAGCAG CGCGCCCGCG CGCGCGGTAG GCATGGAAGG CAGCATCGGA
TCGCTGCGCC CCGGCCGCGT CGGCGACGTC GTGATCTGGG ACAACGACCC GCTCGAACTC
GGCAGCCGAC CGGTCGCGAT CTGGATCGAC GGCAGGGCGC AGTCGCTGAC GACCCGGCAG
GACCGCCTGC GCGATCGCTA TGCGACGCCG CAGGAAGGCG CGTTGCCGAA GGCCTATGAT
CGGTAG
 
Protein sequence
MAAPAAAQDV AITNARLVIG DGSAPIEGGT VVVRGGRVVA AGAGVAVPAG VERVDAEGRY 
VTPGIVAAFS RVGLVEVDAV SGSNDRAAPR TRFSAGLDIA PALNPMGSPV AVNRASGVTR
AIVAPGGSSN LFAGQGAVVD LADDMDMVTR PRALQYVAFG EDGAAKAGGS RAATFLLFRE
QLLAARSYAR NPAALAEWGN DAMLQRADAE ALVRVIDGTT PLFVRVDRAA DIVNVLKLKG
EFPAMKLVLV GVTDGWLVAR EIAAAKVPVL VSPLSDLPDS FERLAATQSN AGRLKAAGVD
VSVGVFDDDD AHKMGYATQY AGNLVGLARM PGASGMTWDQ AFAAISSAPA RAVGMEGSIG
SLRPGRVGDV VIWDNDPLEL GSRPVAIWID GRAQSLTTRQ DRLRDRYATP QEGALPKAYD
R