| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0950 |
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| Symbol | |
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| ID | 4082449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 974126 |
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| End bp | 975502 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638009311 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_616001 |
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| Protein GI | 103486440 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR02915] putative PEP-CTERM system response regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00130546 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGAAA CGGCGGCAGC CCGTCGCAAA CTGCTGGTGG TCGAGGATGA TCCGGGGCTG
CAGACGCAGC TCAAATGGGC CTATGAAGAT TATCAGGTGT TCGTCGCGGG CGACCATGAC
ACGGCGATCG AACTGCTGCG CGCCGAGGAA CCCGATGTCG TGACGCTCGA CCTGGGGTTG
CCGCCCGACC CCGACGGCAC GCGCGAGGGG TTCCGCACGC TGAAAACCAT CGTCGAAGCG
AAACCCGATA CCAAGGTGAT CGTCGTGTCG GGCCATGGCG AACGCGCCAG CGCATTGAAC
GCGATCGCCA GCGGCGCGTG GGATTTTTAT CAGAAGCCGA TCGACATCGA CGCGCTGGGG
CTGATCGTCG CGCGCGCCTT TCACGTCCGC GAACTGGAGG TCGAGAATGC GCGGCTGGCC
AGCCAGGGCG CCCGCGACAA TCGCGTGCTC GGTGGAATGA TCACCGGCGC GCCCGAAATG
CTCAAGGTGG CGCGCACGAT CGAGCGCGTC GCGAACCTCG ACGTATCGGT GATGCTGCTC
GGAGCGAGCG GGACGGGCAA GGAACTGCTT GCGCGCGGGC TGCACGAGGC AAGCGCGCGG
CGCGACGGGG CGTTCGTCGC GATCAATTGC GCCGCGATCC CCGAAAACCT GCTTGAAAGC
GAATTGTTCG GGCATGAAAA AGGCGCGTTC ACCGGCGCGG TCAAGACGAC CGAAGGCAAG
ATCGAACTGG CGCACGGCGG CACGCTTTTT CTCGACGAGG TCGGCGACAT TCCGCTGTCG
TTGCAGGTCA AGCTGCTGCG ATTCCTGCAG GAGCGGACAA TCGAGCGGAT CGGCGGGCGC
AAGGCGATTG CGGTCGATAC GCGAATCGTC TGTGCGACGC ACCGCGACCT CGACGCCATG
CTCGCCGCGC AAAGCTTTCG CGACGATCTT TATTACCGGC TTGCCGAAAT GGTCGTGAAG
ATTCCGTCGC TCGCCGAACG GCCGGGCGAC GCGGTGCTGC TCGCGCGGCA TTTCCTTCAT
CAATATGCAC CCGAAATGAA CCCCGGCGTG CGCGGCTTTG CACCCGACGC GCTACAGGCC
ATCGACGAAG CCCGCTGGCC GGGCAATGTC CGCGAGCTGG AAAACCGGAT CAAGCGCGCG
GTCATCATGG CCGATGGCAA GCTGGTGACG CGCGGGGACC TCGACATGGC CGGCGCTGCG
GAAGAGGAGG AGGATATGTG GCTCAACCTG CGCAGCGCGC GCGAGGCAGC CGACCGCGTC
GCGATCCGCC GCGCGATGAC ACAGAGCGAG GGCAATATCT CGCACGCGGC CAAGCTGCTG
GGGATCAGTC GCCCGACGCT TTACGACCTG CTCAAACAAT ATCGGATGCA GGGCTGA
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| Protein sequence | MNETAAARRK LLVVEDDPGL QTQLKWAYED YQVFVAGDHD TAIELLRAEE PDVVTLDLGL
PPDPDGTREG FRTLKTIVEA KPDTKVIVVS GHGERASALN AIASGAWDFY QKPIDIDALG
LIVARAFHVR ELEVENARLA SQGARDNRVL GGMITGAPEM LKVARTIERV ANLDVSVMLL
GASGTGKELL ARGLHEASAR RDGAFVAINC AAIPENLLES ELFGHEKGAF TGAVKTTEGK
IELAHGGTLF LDEVGDIPLS LQVKLLRFLQ ERTIERIGGR KAIAVDTRIV CATHRDLDAM
LAAQSFRDDL YYRLAEMVVK IPSLAERPGD AVLLARHFLH QYAPEMNPGV RGFAPDALQA
IDEARWPGNV RELENRIKRA VIMADGKLVT RGDLDMAGAA EEEEDMWLNL RSAREAADRV
AIRRAMTQSE GNISHAAKLL GISRPTLYDL LKQYRMQG
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