| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0944 |
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| Symbol | |
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| ID | 4082443 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 963812 |
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| End bp | 965200 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638009305 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_615995 |
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| Protein GI | 103486434 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3800] Predicted transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGAGC GGCGGGTGTT TGCGGGGCCG GCGGTGCGGC GGGCGCGGCG CGCGGCGGGG
ATGACCCAGG CCGCGATGGC CGACGCGCTG GACATATCGC CGAGCTACCT CAACCTGATC
GAGAACGGCC AGCGCCCGCT GTCGGCCACA GTCCTGGTAA AGCTGGCCGA ACGCTTTGCG
TTCGACGCCG CGACCTTGGG CGGCGAGGCG GTGGCGGGGG GCGCGGCGGG GCTCAAACGG
CGGATCGCCG ACCCGCGCTT CGCCGACCTG GGCATCGGCG CCGACGAGGT CGAGGCGTGG
CTCCAGACCG CGCCCGCGAC CGCCGCGGCC TTCGCGCGAC TGTTCGACGC GGCCCCCGAG
GCGGCGGCGG AAGGTGACGG CGACGCACCC GAAGTGGCCG CGGTGCGCCG CGCGATCGAA
AAATGGCGCA ACCATTTCGC CGACCTCGAC GCCCGCGCCG AGGAACTGGC CGACGAGTTG
CGGCTCGCGG GGGGCGACCT CTATGGCACG ATTTCGGAGC GTTTGCGCAC GCGCCACCAG
CTCGGCATCC GCATCCTGCC CAGCGACGTG ATGCCCGACC GCCTCCGCTG GCTCGACTGG
CACGCGCGGC AACTGATGCT GAGCGAACTT CTACGCCCCG CCTCGCGGAC CTTTCAGGCG
GCGGCGACGC TGGCGCAGAT CGAGGCGAAG GGCGAGATCG ACGCGCTGGT CGCGGGCGCC
GAATTCGCCG AAGCCGCCGC GGCGCGGCTG TTCGAGCGGC ACCTGATCCA TTATTTCGCG
GCGGCGCTGA TGATGCCTTA CGGCCGTTTC CTGCGCGCCT GCGATGCGAC GGGATATGAT
CTGCTGCTGC TCCAGCGGCG CTTTGGCGCG GGTTTCGAGC AGGTCGCGCA CCGGCTGACG
ACGCTCCAGC GCGTCGGCGC GCGCGGGCTG CCCTTCTTCA TGCTGCGTAT CGACCGCGCG
GGGCAGGGGA GCAAGCGCTA CGCCGGGGCG AGCCAGTCGC CGCTGACCGA CGGTGACGCG
CGCTGCCCGT TGTGGGGAAT CCACGAAGCG TTCGCGCGGC CGGGCGAGGT GATCGCCGAT
CTGGTCGAGC TGGAGGACGG GACGCGCTGG TTCACGCAAA GCCGCAGCGT CGCCGCCCCC
GGCGCGACCG GGAGCGGCAC GCCCGCGCGC TTCGCGGTAT GCGTCGGCGT CGATGCCAAG
GTCGCGGCGC CCTTGATCGC CGCGCGCGGC ATCGACCTGA TGCGATCGCC CGCAACCCCT
ATCGGTCTGG GATGTCGCCG CTGCACGCGC ACCGGATGCG TGCAGCGGTC AATGCCGCCA
CGCGGCCGCC CGCTGCGGTT CCGCGACGGC GAGCGCGGGG TGAGCGCGTT CGATTTCGCC
GGGGATTGA
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| Protein sequence | MIERRVFAGP AVRRARRAAG MTQAAMADAL DISPSYLNLI ENGQRPLSAT VLVKLAERFA
FDAATLGGEA VAGGAAGLKR RIADPRFADL GIGADEVEAW LQTAPATAAA FARLFDAAPE
AAAEGDGDAP EVAAVRRAIE KWRNHFADLD ARAEELADEL RLAGGDLYGT ISERLRTRHQ
LGIRILPSDV MPDRLRWLDW HARQLMLSEL LRPASRTFQA AATLAQIEAK GEIDALVAGA
EFAEAAAARL FERHLIHYFA AALMMPYGRF LRACDATGYD LLLLQRRFGA GFEQVAHRLT
TLQRVGARGL PFFMLRIDRA GQGSKRYAGA SQSPLTDGDA RCPLWGIHEA FARPGEVIAD
LVELEDGTRW FTQSRSVAAP GATGSGTPAR FAVCVGVDAK VAAPLIAARG IDLMRSPATP
IGLGCRRCTR TGCVQRSMPP RGRPLRFRDG ERGVSAFDFA GD
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