| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0943 |
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| Symbol | |
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| ID | 4080496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 962080 |
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| End bp | 963672 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638009304 |
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| Product | isocitrate lyase |
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| Protein accession | YP_615994 |
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| Protein GI | 103486433 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2224] Isocitrate lyase |
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| TIGRFAM ID | [TIGR01346] isocitrate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.478615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTTATC AGGAAGACAT GGCGCAGGCC GGCCGCCTCA TCCGCGACCA TGACGGCGCA
TGGGATGCCA TCAGCGGCGA AAGCGTCGCC CGGATGCGCG CCCAGAACAG GTTCAGGACC
GGCCTCGACA TCGCCCGCTA CACCGCGCGC ATCATGCGCG CCGACATGGC CGCCTACGAC
GCCGATCCCG CCAACTACAC CCAGTCGCTC GGCTGCTGGC ACGGCTTCAT CGCGCAGCAG
AAGATGATCG CGATCAAGAA GCATTTCGGC ACGACCAAGC GCCGCTACAT CTATCTGTCG
GGCTGGATGA TCGCCGCGCT GCGCAGCGAG TTCGGCCCGC TCCCCGACCA GTCGATGCAC
GAAAAGACCA GCGTTCCGGC GCTGATCGAG GAAATCTACA CCTTCCTGCG TCAGGCCGAC
GCCCGCGAAC TGGGGATGCT CTTCCGCGAC CTCGACGCCG CGCGCGCCGA GGGCGACGAA
CTCAAGGCCA AGCAGGTGCA GGCCGCGATC GACAATCACG AAACGCACGT CGTGCCGATC
ATCGCCGACA TCGACGCAGG CTTCGGCAAT GCCGAGGCGA CCTACCTGCT CGCCAAGAAG
ATGATCGAGG CCGGCGCCTG CGCGCTCCAG GTCGAGAACC AGGTTTCCGA CGAAAAGCAG
TGCGGTCACC AGGACGGCAA GGTCACGGTT CCGCATGAAG ATTTTCTTCA GAAGATCCGC
GCCATTCGCT ACGCCTTCAT GGAACTGGGG GTCGAGGACG GCATCATCGT CGCGCGCACC
GACAGCCTCG GCGCGGGCCT GACCAAGCAG ATCGCCTATT CGAAACAGCC CGGCGATCTT
GGCGACCAGT ATAACAGCTT CCTCGATTGC GAAGAGGTTC CGGGCGCGGG CAACCCCGGC
GATGTCCTCA TTAACCGCAA CGGCAAGCTG ATGCGCCCAA AGCGCCTGCC CTCCAACCTT
TATCAGTTCC GTCCCGGAAC CGGCGAGGAC CGCTGCGTGC TCGACTGCAT TACCTCGCTC
CAGAATGGCG CCGACCTGAT CTGGATCGAG ACGGAAAAGC CGCACATCGA ACAGATTGCC
GGCATGGTCG ACCGCATCCG CGAGGTCGTG CCCAATGCGA AGCTCGCCTA CAATAACTCG
CCGAGCTTCA ACTGGACGCT CAATTTCCGC CAGCAGGTCT ATGACAGCTG GGCAGAGGAG
GGCCGCGACC TGTCGGCATA TGACCGCGCC AAGCTGATGA GCGCCGAATA TGATGACAGC
GAACTTTCCA GCGAAGCCGA CAACCGCATC CGCAACTTCC AGCGCGACGC GGCGAAACGG
GCGGGCATCT TCCATCACCT GATCACGCTG CCGACCTATC ACACGGCCGC GCTCAGCACC
GACAATCTCG CCAGGGAGTA TTTTGGCGAC GAAGCGATGC TCGGCTATGT CAAGGGCGTC
CAGCGCAAGG AAATCCGCGA GGGCATCGCC TGTGTGAAGC ACCAGAATAT GAGCGGAAGC
GACATCGGTG ACGATCACAA GGAGTATTTC GCCGGCGAAG CGGCCCTGAA AGCCGCCGGC
AAAGACAATA CGATGAACCA GTTCGCGGCT TGA
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| Protein sequence | MGYQEDMAQA GRLIRDHDGA WDAISGESVA RMRAQNRFRT GLDIARYTAR IMRADMAAYD
ADPANYTQSL GCWHGFIAQQ KMIAIKKHFG TTKRRYIYLS GWMIAALRSE FGPLPDQSMH
EKTSVPALIE EIYTFLRQAD ARELGMLFRD LDAARAEGDE LKAKQVQAAI DNHETHVVPI
IADIDAGFGN AEATYLLAKK MIEAGACALQ VENQVSDEKQ CGHQDGKVTV PHEDFLQKIR
AIRYAFMELG VEDGIIVART DSLGAGLTKQ IAYSKQPGDL GDQYNSFLDC EEVPGAGNPG
DVLINRNGKL MRPKRLPSNL YQFRPGTGED RCVLDCITSL QNGADLIWIE TEKPHIEQIA
GMVDRIREVV PNAKLAYNNS PSFNWTLNFR QQVYDSWAEE GRDLSAYDRA KLMSAEYDDS
ELSSEADNRI RNFQRDAAKR AGIFHHLITL PTYHTAALST DNLAREYFGD EAMLGYVKGV
QRKEIREGIA CVKHQNMSGS DIGDDHKEYF AGEAALKAAG KDNTMNQFAA
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