| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0937 |
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| Symbol | |
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| ID | 4080490 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 955581 |
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| End bp | 956738 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638009298 |
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| Product | patatin |
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| Protein accession | YP_615988 |
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| Protein GI | 103486427 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGCC GAGCCACCCG CGCCGCGCTT CCGCTTCCCG ATCTGGTCGT GCTTGTCCTG
CAGGGCGGCG GCGCGCTCGG CGCGTTTCAG GCGGGGGTGT ATGAGGCGCT GATCGACCTG
GGGATCGAGC TCGACTGGGT CGCGGGCATT TCGATCGGCG CGGTCAATGC CGCGATCATC
GCGGGCAACG AGCGCGATCA GGCGGTCGGC AAGATGCGTG AGTTCTGGGA AGGTGTGTCG
TCGGCGCTGC CATCGCTGCC GATCCCCGAC ACTGACTGGG CGCGCGAATG GTCGCATATG
GCCGCGGCCG GGCAGGTGAT GGCGTTCGGC GTGCCGGGCT TTTTCACTCC GCGCTTTCCG
CCGCCCGCCT TTGCCGAACG CCAGACGCCC GAGGCGATCA GCTTTTACGA CACGGCACCG
CTTGTCGAGA CACTGAACCG ACTGGTCGAC TGGGACCGGG TGAACAATGG CAAGGTTCGC
CTGTCGGTTG GCGCGGTCGC GGTGGAGACG GGCAATTTCC GTTATTTCGA CACGACCAGT
GATACAATTG ATGCGCGGCA TATTTTGGCA TCGGGTGCCT TGCCGCCGGG CCTGCCGCCG
GTCGAGATCG ACGGCCATTG GTATTGGGAC GGCGGGCTGG TGTCGAACAC CCCGCTCGAA
CATGTCGTCG CGGCGGCGCA TGAGGATATG CTGGTGTTCC AGGTCGACCT TTTCCCCGCG
CGCGGGACGC GCCCGCACGA TCTGGAAGAG GCCTGGTCGC GCGAGAAGGA CATTCGCTAT
TCCAGCCGCA CGCGGCGGAT TTCGGATGGG CTGGTGCGGC GCCGCAAGGA GCATCGGCTG
GTCGACCGGA TGCTCGCGAA ACTGCCCGAA GACCTCGCCG AGCTGCCCGA GGTGAAGGCG
GTGCGGCGGA TGGTCGACTG CAAGGCGCTC AACGTCGTGC AGCTCATCCA CGAACCGCCC
GCCTGGCAGA CCGGCGCGCG CGATTTCGAG TTTTCGCGCT CGACGATGGA GGTCAACTGG
GCGCTCGGCC GCGATGCGGT CGAAGCGGCG ATGAAGGACG GCCATCTGCT CGCCGAAAGC
ATCGCCGAGG GACGGTCGGA CAGCTTCGCG GTGCAGGCCG ACGGGCTGAA GCCCAAGGCC
GACAAGGATA TTCGCTGA
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| Protein sequence | MPRRATRAAL PLPDLVVLVL QGGGALGAFQ AGVYEALIDL GIELDWVAGI SIGAVNAAII
AGNERDQAVG KMREFWEGVS SALPSLPIPD TDWAREWSHM AAAGQVMAFG VPGFFTPRFP
PPAFAERQTP EAISFYDTAP LVETLNRLVD WDRVNNGKVR LSVGAVAVET GNFRYFDTTS
DTIDARHILA SGALPPGLPP VEIDGHWYWD GGLVSNTPLE HVVAAAHEDM LVFQVDLFPA
RGTRPHDLEE AWSREKDIRY SSRTRRISDG LVRRRKEHRL VDRMLAKLPE DLAELPEVKA
VRRMVDCKAL NVVQLIHEPP AWQTGARDFE FSRSTMEVNW ALGRDAVEAA MKDGHLLAES
IAEGRSDSFA VQADGLKPKA DKDIR
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