| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0932 |
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| Symbol | |
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| ID | 4080485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 947359 |
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| End bp | 950154 |
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| Gene Length | 2796 bp |
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| Protein Length | 931 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638009293 |
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| Product | valyl-tRNA synthetase |
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| Protein accession | YP_615983 |
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| Protein GI | 103486422 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0525] Valyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.919072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGATGG AAAAAACCTT CGATCCCGCC GCTATCGAGG CGAAATGGGC CCGGTTATGG
GAAAGCCGCG GGCTGTTCCG CCCGCACCGC CCCGACGCGA CCCCCTTCAC GATCGTCAAC
CCGCCGCCGA ACGTCACCGG CGCGCTGCAC ATCGGCCATG CGCTCGACAA TACCTTGCAG
GACGTGCTGA TCCGTTACGA GCGGCTGCGC GGCAAGGATG CCTTGTGGGT CGTTGGCACC
GATCATGCGG GCATCGCCAC GCAGATGGTC GTCGAACGAC AGCTCAATGA ACGCCAGCAG
AAGCGCACCG ATTTCACCCG CGACGAGTTT GTCGACAAGG TGTGGGAATG GAAAGCGACA
AGCGGCGGCC AGATCACGCG CCAGCTCCGC CGCCTCGGCT GTTCGATGGA CTGGAGCCGC
GAACAGTTCA CGATGGACCC GCATTTTACC AGGGCGGTGG TCAAGGTGTT CGTCGACCTC
CATAAAAAGG GGCTGATCTA CCGCGACAAA AGGCTGGTGA ACTGGGATCC CAAGCTCAAG
ACCGCGATTT CGGACCTTGA GGTCGAAACG CACGAGGTTC AGGGCGGCTT CTGGCACTTC
AAATATCCGC TCGCGGACGG GGTGAAACTC GACGACGGGC ACGACCATAT CGTCGTCGCG
ACGACGCGCC CCGAGACGAT GCTCGCCGAC ATGGCGGTGG CGGTGCATCC CGACGACGCG
CGATACAAGA GCGTGATCGG CAAGTTTGTC GAGCTTCCCA TCACCGGACG CCGGGTGCCG
GTCGTCGCCG ACGAACATGC CGATCCCGAA CTGGGCAGCG GCGCGGTCAA GATCACGCCG
GGGCATGATT TCAACGACTT TGAGGTCGGC AAGCGCGCGG GCTTCAAGCC GGCCGAAATG
CTCAACATGT TCGACGGCGA TGCCAATGTC ATCCAGACCG CCGACGGGCT TATTCCGGCT
GAATATCTCG GGCTCCACCG TTTCAAGCGC GACGGCATCG ACGGCGCGCG CGAACTGGTG
GTACAGCGGA TGAAGGAAAC GGGCTTCCTG ATCCCGCACA CCGACAAGGA CGGCAACGCG
CACGACGCCG AGCCGCGCAC GATCCAGACG CCGTTCGGCG ACCGCGGCGG CGTGGTGATC
GAGCCATGGC TGACCGACCA ATGGTATGTC GACGCCGAAA AGCTGGCGCA GGCGCCAATA
CAGGCGGTGC GCGACGGCCG CATCCAGATC GTCCCCAAGA CGTGGGAAAA GACCTTCTTC
AACTGGATGG AGAATATCCA GCCCTGGTGC GTCTCGCGGC AATTGTGGTG GGGACACCGG
ATTCCGGCGT GGTATGCCGA GGACGGTCGC ACCTTCGTTG CAGAAACCGA AGAGGAAGCA
CAGGCCGAAG CGGGCGCAGG CGTCATCCTG ACGCGCGACC CCGACGTCCT CGACACCTGG
TTCTCCTCCG CCCTCTGGCC CTTCGCGACG CTCGGCTGGC CTGACGATAC GGAGCTTCTG
AAGCGCCATT ATCCCAACGA CGTCCTCATC TCCGGCTTCG ACATCCTCTT CTTCTGGGAT
GCGCGCATGG CGATGCAGGG GATGGAGTTC ATGGGTGAAG TGCCGTGGAG GACGCTCTAT
CTCCACGGCC TCGTCCGCGC GCCCGACGGG CAGAAAATGT CGAAGTCGAA GGGCAATGTC
GTCGACCCGA TCGGCCTGAT CGACCAATAT GGCGCCGATG CGCTGCGCTT TTTCATGTGC
GCGATGGAAA GCCAGGGCCG CGACATCAAG ATGGATGACG CGCGGCTTGC GGGTTATCGC
AATTTCGCGA CGAAGCTGTG GAACGCCGCG CGCTTCTGCG AAGCCAACGG CATTGCGGCG
TCGACCAGCC TCGAAGCCCC CGCGGCCACG CTGCCGGTCA ACCGCTGGAT CATCGGCGAG
GTCGCGGACA CCGTCGCGGC GGTGGAAGCG GCCTTTGCCG CCTATCGCTT CGACGATGCC
GCGAACGCGA TCTACAGCTT TGCCTGGGAC CGCTTCTGCG ACTGGTATCT GGAGCTGATC
AAGCCGGTGC TGTCACAAAA GCCCTCTCCC CTTCAGGGGA GAGGGTTGGG AGAGGGGGAT
GAAGCAGTTC CCGCTCCTGC CGATGGCCCC CTCTCCCCGG CCCTCTCCCC TGAAGGGGAG
AGGGAGATCG CCGAAACCCG CGCCGTCGCC GGCTGGGTGC TCGACCAGAT CCTTGTCATG
CTCCACCCCT TCATGCCCTT CATCACCGAA GAGCTGTGGA CGGGCCTTGG CGACCGCGCC
GACTATCCGC TCATCACCGC CAAATGGCCC GCGCCGAATG CTGCGCGTGA TGCGGCGGCC
AGCGCCGACA TCGACTGGCT GATCAAGCTG GTCAGCGAAT TGCGCACGGC CAAGGCCGAA
CTCGGCCTGC CCCCTGGCGC GCGCCTGACC GCCCATTTCC CCGCCTCACT CAAGGATCGC
GCCGACAAGC TTGCGGCGCA GCTCGACCGC CTCGCACGCC TCGAAACCAT CAGCTTCGAC
CCCGCCCCCG CGGGCGCATC GGCGCAGCTT GTCGTCGAGG GCGAGACGAT CACCATCCCG
CTCGAAGGCG TAATCGACAT CGCCGCCGAG CGCGAAAGGC TGACCAGGGC GCTCGCCGCC
GCGACGAAAG AGCGCGACAG CCTCGCCGGG CGCCTCAACA ACCCCTCCTT CGTCGAGCGC
GCCAAGCCCG AAGCCGTTGA AAAGGCGCGC ACCGACCATG CCGCAAAGGA GGCCGAGGCC
GACCGCCTGA GCGCGGCGCT CGCGCGTCTG GGCTGA
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| Protein sequence | MPMEKTFDPA AIEAKWARLW ESRGLFRPHR PDATPFTIVN PPPNVTGALH IGHALDNTLQ
DVLIRYERLR GKDALWVVGT DHAGIATQMV VERQLNERQQ KRTDFTRDEF VDKVWEWKAT
SGGQITRQLR RLGCSMDWSR EQFTMDPHFT RAVVKVFVDL HKKGLIYRDK RLVNWDPKLK
TAISDLEVET HEVQGGFWHF KYPLADGVKL DDGHDHIVVA TTRPETMLAD MAVAVHPDDA
RYKSVIGKFV ELPITGRRVP VVADEHADPE LGSGAVKITP GHDFNDFEVG KRAGFKPAEM
LNMFDGDANV IQTADGLIPA EYLGLHRFKR DGIDGARELV VQRMKETGFL IPHTDKDGNA
HDAEPRTIQT PFGDRGGVVI EPWLTDQWYV DAEKLAQAPI QAVRDGRIQI VPKTWEKTFF
NWMENIQPWC VSRQLWWGHR IPAWYAEDGR TFVAETEEEA QAEAGAGVIL TRDPDVLDTW
FSSALWPFAT LGWPDDTELL KRHYPNDVLI SGFDILFFWD ARMAMQGMEF MGEVPWRTLY
LHGLVRAPDG QKMSKSKGNV VDPIGLIDQY GADALRFFMC AMESQGRDIK MDDARLAGYR
NFATKLWNAA RFCEANGIAA STSLEAPAAT LPVNRWIIGE VADTVAAVEA AFAAYRFDDA
ANAIYSFAWD RFCDWYLELI KPVLSQKPSP LQGRGLGEGD EAVPAPADGP LSPALSPEGE
REIAETRAVA GWVLDQILVM LHPFMPFITE ELWTGLGDRA DYPLITAKWP APNAARDAAA
SADIDWLIKL VSELRTAKAE LGLPPGARLT AHFPASLKDR ADKLAAQLDR LARLETISFD
PAPAGASAQL VVEGETITIP LEGVIDIAAE RERLTRALAA ATKERDSLAG RLNNPSFVER
AKPEAVEKAR TDHAAKEAEA DRLSAALARL G
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