Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0930 |
Symbol | |
ID | 4080483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 945354 |
End bp | 946085 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638009291 |
Product | response regulator receiver protein |
Protein accession | YP_615981 |
Protein GI | 103486420 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3279] Response regulator of the LytR/AlgR family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.748451 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCAGA CCTTGCGCAC GTTGATCGTC GATGACGAAC CGCTCGCGAT CGAACGGCTC CAGATCCTTG CGGGGCAACA GGACGGGATT TCGCTCGTCG GCACGGCGAG CGACGGCGCC TCGGCGCTTC GCATGGTCGA TGCGCTGGCA CCCGACCTGC TGCTCTGCGA CATCGCGATG CCCGACCTCA ACGGGCTGGA GGTGGCGGCG GCGATCGAGC GGCTCGACAA TCCGCCCGCC ATCGTCTTCG TCACCGCTTT CGACCGCTAT GCCGTCGCGG CGTTCGAGGT GGCGGCGGTC GATTATCTGC TGAAACCCGT TTCCCCCGAT CGGCTGACGC GCGCCGTGTC GCGCGTGCGC GAATGGCGCG CGGCCGAACG CCCATCGAAA CAGAAAAGCA AATGGATCAC CGAGTTCTGG GTTCAGAACC GCGGCGAAAT GCTGCGCATC GACGCGGCGC AGGTCGATCT GATCGAGGCC GAGCGCGACT ATATGCGCCT GCACGTCGGC GCGCGCAGCT GGCTGATCCA TCAGACGATC AAATCGCTGG AAGCGCGGAT GAACCCTGAC CAGTTCATGC GCATCCACCG ATCGAAGATG ATCCGGCGCG ACGGCATCGT CGGCCTGAAA CACCATGGCG ACGGCGCGTG GAGTGTCGAC CTGGGTGAGG GCGGCGTCCA TCGCATCGGG CGCACCTACC TCCACGATGT AAAGGCGATC ATGCACGCCT GA
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Protein sequence | MLQTLRTLIV DDEPLAIERL QILAGQQDGI SLVGTASDGA SALRMVDALA PDLLLCDIAM PDLNGLEVAA AIERLDNPPA IVFVTAFDRY AVAAFEVAAV DYLLKPVSPD RLTRAVSRVR EWRAAERPSK QKSKWITEFW VQNRGEMLRI DAAQVDLIEA ERDYMRLHVG ARSWLIHQTI KSLEARMNPD QFMRIHRSKM IRRDGIVGLK HHGDGAWSVD LGEGGVHRIG RTYLHDVKAI MHA
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