| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0920 |
|---|
| Symbol | |
|---|
| ID | 4083130 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 932756 |
|---|
| End bp | 933811 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638009281 |
|---|
| Product | LacI family transcription regulator |
|---|
| Protein accession | YP_615971 |
|---|
| Protein GI | 103486410 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.830745 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAGAC GCCGCCAGGC GGTGACGATC AAGCATGTGG CGGCCGATGC CGGTGTGTCG
CTGCAAACGG TCAGCCGTGT GATCAACGAC GAACCCAATG TGCGCTCGGC AATGAAGGCG
CGCGTCCAGG CGTCCATCGA CAAGCTCGGC TATGTGCCGT CGATTGCCGC CCGCCGGATG
AGCGGGTCGC GCTCTTATCT GATTCTGGCG ATCAACGATC GCGACCGGAC GATCGCGGAC
TGGACGGCGC GGCAGGGCAC CGATTGGGTC GACCAGATGC TGCTGGGCGG CATGCTCAAG
TGCGCCGAAT ATGGCTATCG GCTTATTTTT GAGCTTGTCG ACACGCACAG CGACCATGTC
GAACGCGAAC TGCGCGCAAC CATCGCGGCG CTTCAGCCCG ACGGCGTGAT TCTGACGCCC
CCCCATTCCG ACAATCCGCT GATCGTGCGA TTGCTTGAAC GGCAGCGAAT ACCCTTTGCG
CGCATCGGAT CGCGCGGCGG AGGGGCGGGG ATTGCGCTGG TGATGGATGA CGAGAGCATG
GCGCGCCACG CGACGCGTCA CCTCATCGAC CTTGGCCATC GGCGCATTGC TTTCATTGCA
GGTTCAAGCG AATATCCGCT GAGCCAATGG CGCGTCGATG GTTGGGAAAG CGAAATGCGT
GCCGCGGGAT TGCCGACCGC CGGACTCGTG GCGAGAGGCG ACTTCACTTA CGAATCGGGC
GCGGCCGCCA CGCGGCAGCT TCTTGGTCAT CCGGATCGCC CTTCGGCGAT CATCGCCAGC
AATGACCAGA TGGCGCTCGC CGCGCTCGAA GTCGCGCGCG AACTGGGGAT CGAGATTCCG
TCACAGCTTT CGCTCGTAAG TTTCGACAAT ACGCCGATCG TGCGTTTTAC CCAGCCGACG
CTTACCGCCG TTGATCAGCC GGTCGCCGAA ACCGTGTCGC GCGCCGTCGA AATGATCATC
AAGGCGCAGC GGGGGGAAAA GTTGCCGCCA CAACCCGTGA TTGTTGCCGG GGGCTTCGTC
GAACGCGAAT CGACTTCTGC GCCCGCGCAT GGATGA
|
|---|
| Protein sequence | MARRRQAVTI KHVAADAGVS LQTVSRVIND EPNVRSAMKA RVQASIDKLG YVPSIAARRM
SGSRSYLILA INDRDRTIAD WTARQGTDWV DQMLLGGMLK CAEYGYRLIF ELVDTHSDHV
ERELRATIAA LQPDGVILTP PHSDNPLIVR LLERQRIPFA RIGSRGGGAG IALVMDDESM
ARHATRHLID LGHRRIAFIA GSSEYPLSQW RVDGWESEMR AAGLPTAGLV ARGDFTYESG
AAATRQLLGH PDRPSAIIAS NDQMALAALE VARELGIEIP SQLSLVSFDN TPIVRFTQPT
LTAVDQPVAE TVSRAVEMII KAQRGEKLPP QPVIVAGGFV ERESTSAPAH G
|
|---|
| |