| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0914 |
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| Symbol | |
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| ID | 4083124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 923955 |
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| End bp | 926918 |
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| Gene Length | 2964 bp |
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| Protein Length | 987 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638009275 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_615965 |
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| Protein GI | 103486404 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGATT CGCGGAAGGT CCGTTTCGAT CGCTTGGCAA TGGGCGTCTC GCTGCTTGCG
ATCGGCATCG CATGTCAACC GGCCCTCGCC CAGGATGACG TCGTTGCGCA GAATGAGGAC
GACGCGATCG TCGTTACCGG CATCCGTGCA AGTCTCGAAC AGGCGCAAAA TATCAAGCGC
AATGCACAAG GCGTGGTCGA TGCCATTTCC GCCGAAGACA TCGGCAAGTT CCCCGACACC
AATCTGGCGG AGTCGCTGCA ACGCATCACC GGCGTATCGA TCGACAGGGC CAGCGGGGAA
GGGTCGACCG TCACGGTCCG CGGTTTCGGC CCCGAGTTCA ACCTTGTCGT GGTGAACGGC
CGCCAGATGC CGACATCGAC CCTCGGTGAC GGCTTCTCGG CACCATCGAC ACGCAGCTTC
GATTTCGGCA ACCTCGCCGC CGAAGGCGTC GCCGGGGTCG AGGTTTACAA GTCGGGCCGC
GCTTCGCTTC CCACCGGCGG TATCGGCTCG GTCATCAACA TCAAACTGCC ACGACCGCTG
GATCGCCCCG GCCTCAATGG CAGCATCGGT GTCAAGGGCG TTTACGACAC GTCGCAACTT
TATGGCACGG ACGTCACGCC CGAGATCTCG GGCATCATCA GCAAGACCTT CGCCGATGAC
CGCATCGGCA TCCTGCTCGC CGGTTCCTAT CAGAAGCGTA ATGGCGGCCA GGCGCAGTTC
ACTGTGGGCA ATTGGCGGCC TGGCTATACG GGTGCGGAAA ACAACTGGGG TACGCTTGCG
CAACCCGGAG ACCCGCGTTT CGCCAATATC GAAAACCGCC CCGGACCCAC CGACATTTAC
CAGGTTCCGC AGAATGCGGC GTATGATTTT TACGATTTCC AGCGCGAGCG GATCAACGGC
CAGGCGGTGC TGCAGTTCAA GCCGACCGAC AGCCTCGATG TGTCGCTCGA CTATATTTTT
GCGCAAAACA CCTTTGACAG CCGCCAGAGC AGCATCGGCG TGTGGTTCAA TCACAATGAC
ACGTCGAGCA GCTGGACCAA CGGCCCCGCC GCGGGCGCCA ATTTCTACGC GGAGAATTTC
GCTGCCGCCG AAGGCAAGGA TCTGGCGATC ACCGGCGCGG TCGGTTCGAA CCGCAATATC
AACCATTCGT TCGGCGGCAA CATCAAGTGG GAAGGGCCCT GGGGGCTGCG CCTCGAACTC
GACGGCCACC ATTCCACCGC GGAATCGAAG CCGACCTCGC CTTATGGCAG CGGGATTGCC
GTCGGTACGG CCATCTTTGG CGTTGCCAGC CAGAGAGTGG ACTTCACCAC CGACATGCCG
GTCATTTCGG TCGCCATGCA CCCCGGTTCC GAGATCGCGG CTGAGAATAT TCGTCCGGCG
GGCAATGCTT TCCGCAATGC CTATATGAAG GATACGATCG ATCAGGTCAG CTTGCGTGGC
GGCTTCGATT TCGATGCGTC ATTCATCGAA AGCCTCGATT TCGGCGCGAG CTACCTCGAG
AATGATGTGC GGACGGCATT CGGGGTGATC CAGAATGACA CGTGGGGCGG AACCTTGTCT
GCGGCCGATA CGCCGGATTC GCTGTTCACG CCGCGCGCAC TCTCCCCCGA TCTTTCCGGC
ATGAGCGGAT CGAGGGACCC GGCCATCATT CCGACCTATT TTCTGATCGA CACGGCAGGG
CTGATTTCAC TCCTCGACGA CAGGCTCGGG ATCTGTGACG CCGCGCCGGG CGATACTTGT
CTGGCGCCTT ATTCCACCGA CCGGCGCATC TTGGAAAAGT CGATTACGCC CTGGGTGCAG
TCCTTCCACA GCTTCGATCT GGGCGATGCC AGGGCGAATC TGCGTCTTGG ACTGCGCTAT
GAGAAGACCA AGGTTACGTC GAGGGCGCTC GCCGAGATCC CCACGGGCAC CGTCTGGGTC
GCGCAGAATG AAATCAGCCT GGTCAAAACG CCCGGTACCG ATTTCACGAC GCTGAAAGGC
GAGTATGATA ACTGGCTTCC TGCGATCGAT TTCGATCTGT CGCCCTTTGA AAATGTGAAG
CTGCGCGCGT CTTACAGCCA CACGATTACC CGCCCGGACT ATGCCAGCAT GCAAGGCGGC
ATTACGCTCG CGCAGCCGCT GCGCGTCGGC GCGGGCGGCA GCCAGGCAAG CGCCGGCAAT
CCGGCTCTGC TCCCCTACAA GTCCAAGAAT GTCGATTTGT CGGCCGAATG GTATTATGAT
CGGGCAAGCT ATGTGTCGGT AGGCTTCTTC AACAAGAAGG TCAGCAATTT CATCGCCAAC
GACACCACCC AGACGCCTTT GTTCGACTTG CCCGATCCGT CGCAGGGCGC GGCGGCCACG
GCAGCGCGCC AGGCGCTCGG GCCGAATGCG AGTTTCGACC AGATCGTCGC CTGGGTTCAG
GCCAATCGGC CAGCCGACTA TGTGGCCGGC GTCGGGACGG CGGGTGGCGT TGCGGGTCGT
GCCGGCGATC CGAACGTCAT CTTCACCTTC ACCCAGCCAT CGAACAGCGA TCAGCAGGCG
CGGCTGTGGG GCTGGGAGTT TGCGATCCAG CATAATTTCT GGGATACCGG CTTCGGCGCG
ATCCTCAACT ACACGGTGGT CAACAGCGAT ACGGGATTTG ACAACACATT GCCGTGGACG
ACCACGCAAT TCGCTGTTCC GGGCGCGAGC GACAGCGCGA ACGCCGTGCT TTATTACGAC
AAAAACGGCT TGCAGGCGCG TATCGCCTAC AACTGGCGGG ACCGGTTCCT GGCCGGCAAG
GATCAGGATC CCTATTACAT CAAATCCTAT GGCCAGTTCG ACGCCAGCCT GAGTTACGAG
TTCAAGAAAG GCCTCACCGC GTTCGTCGAA GGTATCAACA TTACCAACGC CGACCGGACA
GGCGTGCGCC GTAACGATCG CGCGATCTTC TTCGCGGCGC CGGGCTATGC GCGTTATTCG
GCGGGCATTC GATTCACTTT CTGA
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| Protein sequence | MNDSRKVRFD RLAMGVSLLA IGIACQPALA QDDVVAQNED DAIVVTGIRA SLEQAQNIKR
NAQGVVDAIS AEDIGKFPDT NLAESLQRIT GVSIDRASGE GSTVTVRGFG PEFNLVVVNG
RQMPTSTLGD GFSAPSTRSF DFGNLAAEGV AGVEVYKSGR ASLPTGGIGS VINIKLPRPL
DRPGLNGSIG VKGVYDTSQL YGTDVTPEIS GIISKTFADD RIGILLAGSY QKRNGGQAQF
TVGNWRPGYT GAENNWGTLA QPGDPRFANI ENRPGPTDIY QVPQNAAYDF YDFQRERING
QAVLQFKPTD SLDVSLDYIF AQNTFDSRQS SIGVWFNHND TSSSWTNGPA AGANFYAENF
AAAEGKDLAI TGAVGSNRNI NHSFGGNIKW EGPWGLRLEL DGHHSTAESK PTSPYGSGIA
VGTAIFGVAS QRVDFTTDMP VISVAMHPGS EIAAENIRPA GNAFRNAYMK DTIDQVSLRG
GFDFDASFIE SLDFGASYLE NDVRTAFGVI QNDTWGGTLS AADTPDSLFT PRALSPDLSG
MSGSRDPAII PTYFLIDTAG LISLLDDRLG ICDAAPGDTC LAPYSTDRRI LEKSITPWVQ
SFHSFDLGDA RANLRLGLRY EKTKVTSRAL AEIPTGTVWV AQNEISLVKT PGTDFTTLKG
EYDNWLPAID FDLSPFENVK LRASYSHTIT RPDYASMQGG ITLAQPLRVG AGGSQASAGN
PALLPYKSKN VDLSAEWYYD RASYVSVGFF NKKVSNFIAN DTTQTPLFDL PDPSQGAAAT
AARQALGPNA SFDQIVAWVQ ANRPADYVAG VGTAGGVAGR AGDPNVIFTF TQPSNSDQQA
RLWGWEFAIQ HNFWDTGFGA ILNYTVVNSD TGFDNTLPWT TTQFAVPGAS DSANAVLYYD
KNGLQARIAY NWRDRFLAGK DQDPYYIKSY GQFDASLSYE FKKGLTAFVE GINITNADRT
GVRRNDRAIF FAAPGYARYS AGIRFTF
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