Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0903 |
Symbol | |
ID | 4082803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 912284 |
End bp | 913561 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638009264 |
Product | cytochrome P450 |
Protein accession | YP_615954 |
Protein GI | 103486393 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2124] Cytochrome P450 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0338626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAGTC TAGCCGAACG CTGTCCGGTG GCACGGGCGG GCGCCGATGC CCCGCCCGCC CCCGCGCATG TCCCGCCCGA CCTTGTGCTC GACACCCGCT TCGCGGCGGG CATCGTCCCC AACGACCTGG CCGAGCCCTA TCGCCCGATG GACGTGGTGC GCGACGAGGC CTTTCCGCGC ATCCATTATT ATCCCTGGCC GATCAGCGGC AACCGGCACG GCGCGTGGGT CGTGACCCGA TATGAGGATA TTCGCCGCGT CTATGAGGAT AACGAGCTTT TCTCCTCCGA AGGCGTCGCC CAGTTCCAGG CACTGGCCGG CGAAACCTTT CCGTCGATCC CGCTTGGCAT CGACCCGCCC GATCATGGCC GTTACCGCAA GTTCCTGAAC CCCTGGTTCA CCCCCGTTGC GATGAATGCG CGCGAACCGC GCATCCGCGA GATCATCGGC GGGATGATCG ACCAGTTCGC CGACAGGGGC GAGGTCGATA TTGCTTATGA TTTCGGGCGC GTGTTCCCGG TGCGCGTCTT TCTGGATCTG ATGGGTTTCC CCTTCACCAT GTTCGACCAG TTCCTCGACT GGGAGTTCGC CATTCTGCAC GACGACCGGA TCGACAAGAA GGTGGAGGCG CTGACAGCTG TGCTGGCCTA TCTACGCGGC TTCATCGCCG ACAAGCAGGC CAGCCCGGAT GCCAATCTGG GCAGCTATAT CGCCAATGGT TCGATCGACG GCGTCCCGCT CACCGACGAT GAAAAGATCG GCATAACCTG GTTCCTGTGG CTGGGCGGCC TCGATACCGT CGCCTCGACG GTCAGCCAGA TGTTCCGCCG TTTCGCAATG CACCCGCAGC TTCAGAAACG GATCCGCGAG GACAAGTCGC TGATCAACTC TGCCGTCGAG GAGTTTCTCC GCACCCAGCC GCTCGTCAAT TCGGGGCGCA AGGTGAAGCG CGATTTCGAA TGGCACGGCG TACAGATCAA GGCCGGTGAC TGGGTGACGG CATTCAACAC ATCTGGGAAC TTTGATCCCC AACAGTTTGA ATGTCCCCAT CAATTCGACC CGGAGCGCAG GAACAACCGC CACTTCACAT TGGCTGGCGG GGTGCACATC TGTCTGGGCG CGCATCTGGC GCGGCGGGAG CTTCGCGTGC TCCTCGACGA ATGGTTCACC CGTATCCCGT ACGAGTTCCG CGTGCGCGAG GGCGCGGATA CGACGGTGGT GCCCAGCCTG TTGTCGATCC GCAATCTGCC CATCGTTTGG GACTGCAAGG CCGCCTGA
|
Protein sequence | MTSLAERCPV ARAGADAPPA PAHVPPDLVL DTRFAAGIVP NDLAEPYRPM DVVRDEAFPR IHYYPWPISG NRHGAWVVTR YEDIRRVYED NELFSSEGVA QFQALAGETF PSIPLGIDPP DHGRYRKFLN PWFTPVAMNA REPRIREIIG GMIDQFADRG EVDIAYDFGR VFPVRVFLDL MGFPFTMFDQ FLDWEFAILH DDRIDKKVEA LTAVLAYLRG FIADKQASPD ANLGSYIANG SIDGVPLTDD EKIGITWFLW LGGLDTVAST VSQMFRRFAM HPQLQKRIRE DKSLINSAVE EFLRTQPLVN SGRKVKRDFE WHGVQIKAGD WVTAFNTSGN FDPQQFECPH QFDPERRNNR HFTLAGGVHI CLGAHLARRE LRVLLDEWFT RIPYEFRVRE GADTTVVPSL LSIRNLPIVW DCKAA
|
| |