| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0902 |
|---|
| Symbol | |
|---|
| ID | 4082802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 910795 |
|---|
| End bp | 912270 |
|---|
| Gene Length | 1476 bp |
|---|
| Protein Length | 491 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638009263 |
|---|
| Product | betaine-aldehyde dehydrogenase |
|---|
| Protein accession | YP_615953 |
|---|
| Protein GI | 103486392 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.864011 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTTC TGAAATATGC CGACGCCATC TATGTGGGCG GCGAATGGGA GAAGACCGAT
CGGCGCGAGG CGGTGATCAA CCCCGCGGAC GAAAGTCTGC TGATCGAGGC ACCGGTCGGC
AGCGCGCGGC AGGTCGAAGC CGCAATCGGC GCTGCTCGCC ATGCTTTCGA CAGAAGCGAC
TGGTCGCATC TGCCGGTCGC CGAACGGCAG AAAATCCTGA CCCGCTTTCT GGACGCGCTG
GATGCCCGCA AGGGCGCAAT CGTCGACATG ATCGTTGCCG AGGCGGGCGC GACGCGGATG
CTGGCGGAGT TCCTGCAATA TGGCATCCCG ATGAAACATG CGCGGCGCAC GGTGGAACTG
GCATCGCGGC CCGCCGTCAC CCCGCTGCCC GTCGAACTCA CGCCGAACGC GCAGGGCCGC
ACAACGCTGG GCACCGGCGT GGTCAGCCGC GAGCCGGTCG GGGTGGTGGC CGCCATTTCC
CCCTATAATT TCCCCTTCTT CCTGAACGTC GGCAAGGTCG TTCCGGCGCT TGCGGTGGGC
TGCACGGTGG TTCTGAAGCC GTCGCCCTAC ACCCCGATGG AAGCGCTGAT CCTGGGCGAA
ATCGCCGACG AGGTGGGATT GCCGAAAGGC GTTCTCAGCA TCGTGACCGG CGACATCGAA
ACCGGCAAGC TGCTCACCAC CGATCCGCGC GTCGATCTGG TGCATTTCAC CGGGTCGGAC
AAGGTCGGCG CGATGATCCA GGCGCAGGCG GCGCCGACGC TGAAACGGAT CGTGATGGAA
CTGGGAGGCA AATCGGCGCT GATCGTCCGC AGCGACGCGG ACATTCAAAA GGCCGCCGCA
GCGGGATTGA TGGGGTTCAC CACCCACTGC GGCCAGGGCT GCGCGCTCAC CACCCGCCAT
TTGGTCCACA ACAGCGTCCG GCCGCAATTT GTCGAAGCGC TGAAAGGGAT GCTGACGCAT
ATCAGGATCG GCAACCCCGC CGACCCCGCG GTCAATTACG GCCCGTTGAT CCGCGAAGTC
GCGCGCAAAC GGACCGAGGA TTATGTCGCA ATCGCCCGCG ACGAGGGCGC GACGCTGGTG
TCGGGCGGAA AACGCCCGGA AGGGCTGGAC AAGGGCTTTT ATTTCGAGCC GACGCTGTTC
GACAATGTCA AGAATGACAG CCGGCTGGCC CAGGAAGAGG TTTTCGGACC GATCGGGGCG
GTCATCGGTT TCGACGATGA CGACGAAGCG ATTGCCCTGG CCAATGCCAG CGATTTTGGC
CTGTCCGGCG CGATCTATTC GGCCGATGCC GGGCAGGCCT ATCGGATGGC GCTCAAAATC
CGGACCGGCG GCGTATCGAT CAACGGCGGC GCCGGCACGA TGCAGTCCGA TGCCCCCTTC
GGCGGTATCA AGCGGTCGGG CTATGGCCGC GAATATGGCG AGGATGGCCT GAACGAATTC
ACCTATCAAA AGGTGATCGG TTTCCACGCC GAATAG
|
|---|
| Protein sequence | MPFLKYADAI YVGGEWEKTD RREAVINPAD ESLLIEAPVG SARQVEAAIG AARHAFDRSD
WSHLPVAERQ KILTRFLDAL DARKGAIVDM IVAEAGATRM LAEFLQYGIP MKHARRTVEL
ASRPAVTPLP VELTPNAQGR TTLGTGVVSR EPVGVVAAIS PYNFPFFLNV GKVVPALAVG
CTVVLKPSPY TPMEALILGE IADEVGLPKG VLSIVTGDIE TGKLLTTDPR VDLVHFTGSD
KVGAMIQAQA APTLKRIVME LGGKSALIVR SDADIQKAAA AGLMGFTTHC GQGCALTTRH
LVHNSVRPQF VEALKGMLTH IRIGNPADPA VNYGPLIREV ARKRTEDYVA IARDEGATLV
SGGKRPEGLD KGFYFEPTLF DNVKNDSRLA QEEVFGPIGA VIGFDDDDEA IALANASDFG
LSGAIYSADA GQAYRMALKI RTGGVSINGG AGTMQSDAPF GGIKRSGYGR EYGEDGLNEF
TYQKVIGFHA E
|
|---|
| |