| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0898 |
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| Symbol | |
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| ID | 4082798 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 906523 |
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| End bp | 907917 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638009259 |
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| Product | major facilitator transporter |
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| Protein accession | YP_615949 |
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| Protein GI | 103486388 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.325125 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGGACC GGCGCAACCT GCCGTTGTTG ATCGGCGCCC TCTGGGTCGC GGAAGTCACC
GGATCGTTCG AAACGGCGAT GATCCTTGCC GCGCTCAAGC GGCTGATCGA GGATTTCGGC
AATCCGGCGA TGGTGGGCTG GCTGATCACC GGCTATCTGA TCGTCGGCGC GGCGATCGCC
GCGGTGGTCG GCCGCCTCGG CGACCTGTTC GGGCGACGCC AGACGCTGAT CATTGTATTG
ACGATCGGCG CGATCGGTTC GTTGATCAGC GCCCTGTCAA CCAGCTTTCC CGTCCTCTTG
GCGGGCCGCC TGATGCAGGG CGTTACCGGC GCGATCCTGC CGCTCTGTAT CGGGCTGGTG
CATGAAAACA TGTCGAGGGA CCGGGCGCCG ATGGGTATCG GACTGATGAT TTCCGGTGCA
TCGATCGGCA CGGCGGCGGG GCTTGTCGTC GGCGGAATGA TCGTCGACAG CTTTAACTGG
CATGGGATAT TCTTTGCCAG CGCGGGCCTG TGTGTGACCG CCGCGCTCGC CACCCGCGCT
TTCGTCCCGG CCTCGCCGCG TCAATATGGC GGCGCCCCGG TGGACTGGAT TTCGGGCTTG
GCCTTTGCTC CCGGAGTGGC GCTCGTCCTC GTTTACTTCA GCATGGGCAA GACGTGGGGC
TGGTCCAGTG CGTGGACCCT CGGGCCGCTG TTGACGGGCG CCTTGCTGCT GTTCTGGTGG
ATGCGGCACA GCCTTGCCAG CCCCAATCCT CTCATCGCGG TCCGCAGCTT TTCCAATCGT
ACGATCGCGA TCGGCGGGGC GGTGACGGCG CTGGTGTCGA TGGGGACGCT TCAGATCACC
GTCTTTTTCT CCCTGCTGAT GCAGGCGCCG ACCTGGACCG TCGCCGGGCT GGGATTTTCG
GCGACGCTCG CGGGCCTTGC GAAGCTGCCC TCGAACCTCA GCTCGACCTT CGCGGGGCCG
CTCGGCGGCT GGCTCGCGGG GCGCGGCGGC GGCCGTTTCG CGCTGGTTGT CGGCGGCGCG
CTCACCACGG CGGGCTGGCT CGTCTGGTTC CTGCTCGATG TGAACAGCTT TCCGATGGTC
GTCGCACAGC TCATCCTGAT TTCATTCGGC GCGACGATGC TTTTTTCGGT CGCGCCGACG
ATCATCGCAC AGGCGTCGCC GCCCGAGCGG ATCAGCGAGA TTTCGGGAAT GCTGACCGTC
ATTCGCCAGC TTTTCCTGGG CATCGGTGCC CAGATGGTCA CGACCCTGCT CGCGGTGGAT
GTCGTGCGCC GCGGGGACGA GGTCTATCCC TCGCCCTTTT CCTACGATCT CGCCGTCACG
GCGATCGTCG CACTGTGCGT CGGCGCGATC CTGATCGCCT TCCTCCTTCC CCGCTCCATC
AGGGAAACGC CATGA
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| Protein sequence | MGDRRNLPLL IGALWVAEVT GSFETAMILA ALKRLIEDFG NPAMVGWLIT GYLIVGAAIA
AVVGRLGDLF GRRQTLIIVL TIGAIGSLIS ALSTSFPVLL AGRLMQGVTG AILPLCIGLV
HENMSRDRAP MGIGLMISGA SIGTAAGLVV GGMIVDSFNW HGIFFASAGL CVTAALATRA
FVPASPRQYG GAPVDWISGL AFAPGVALVL VYFSMGKTWG WSSAWTLGPL LTGALLLFWW
MRHSLASPNP LIAVRSFSNR TIAIGGAVTA LVSMGTLQIT VFFSLLMQAP TWTVAGLGFS
ATLAGLAKLP SNLSSTFAGP LGGWLAGRGG GRFALVVGGA LTTAGWLVWF LLDVNSFPMV
VAQLILISFG ATMLFSVAPT IIAQASPPER ISEISGMLTV IRQLFLGIGA QMVTTLLAVD
VVRRGDEVYP SPFSYDLAVT AIVALCVGAI LIAFLLPRSI RETP
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